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SCNpilot_expt_500_bf_scaffold_3363_11

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(9307..10059)

Top 3 Functional Annotations

Value Algorithm Source
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR89_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 248.0
  • Bit_score: 286
  • Evalue 2.20e-74
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EIM01414.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 248.0
  • Bit_score: 279
  • Evalue 5.00e-72
putative two-component hybrid sensor and regulator similarity KEGG
DB: KEGG
  • Identity: 30.3
  • Coverage: 251.0
  • Bit_score: 85
  • Evalue 3.10e-14

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGAACGACAAGGATTTCGTCTTGAGCGAGCGCCCGGAATCTTGCAGTTCGTCCCTCCGCCAGGCACCCCGCCCCTACGTTCTGGTCGCCGATGACGACCCCGGCAGTTGCCGCTTCCTCGGCGACGGGCTGCGCTCGCTGGGCGCCACGGTGGAGACCGCCGGCAGCGGCCGGGAAGCGCTGGAGCGCGCCGGTGCGGGCAAGTTCGACCTGTTGCTGCTCGACTGCCGCATGCCCGGCGGCGGCGCCCTGCACGTGCTGGAGCAACTGCGCGCCGATGTCCGCTCCGCCTCCGTCGACAGCACCGCCGTGGCCACCAGCGCGGACATCGCGCCGGCCGACCGCGACGACCTGCTGGCGGCAGGCTTCAGCGACATCCTGCTCAAACCCTGCACCCTGACCGACCTGCGCCGCGTGCTGGCGCTGATCCAGGCCGAGTCGTCGTCCGTGCTGGACGATGGCGCGGCGCTCTGCAGCAGCGGCGACGCCACCACGATGCGTGCGTTGCGCCTGTTGCTGCGCGAGGAACTCGCGCTGCTGCAAGGCGAACTGGACCAGCTCAGCGCCGACCGCGTCGCATTCGCCGAACGGCTGCACCGGCTGCGTTCCTCATGCGGATTTTGCGGTGCCACGGCGCTGGCCGAACAGGCGGTGCGACTGCAGCGGCAACTCCTGCCCGACGGCTCCGCGCCCGCCGCGTTGGCCAGCTTCCGCCGCGTGCTGGCCGCGACGCTGCAGGCGCTGGACAGCTAG
PROTEIN sequence
Length: 251
MNDKDFVLSERPESCSSSLRQAPRPYVLVADDDPGSCRFLGDGLRSLGATVETAGSGREALERAGAGKFDLLLLDCRMPGGGALHVLEQLRADVRSASVDSTAVATSADIAPADRDDLLAAGFSDILLKPCTLTDLRRVLALIQAESSSVLDDGAALCSSGDATTMRALRLLLREELALLQGELDQLSADRVAFAERLHRLRSSCGFCGATALAEQAVRLQRQLLPDGSAPAALASFRRVLAATLQALDS*