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SCNpilot_expt_500_bf_scaffold_3612_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3..356)

Top 3 Functional Annotations

Value Algorithm Source
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 241
  • Evalue 7.10e-61
NADH-quinone oxidoreductase subunit D n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKF9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 241
  • Evalue 5.00e-61
NADH dehydrogenase I, D subunit similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 116.0
  • Bit_score: 239
  • Evalue 6.00e-61

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGGCCCAGGAAATCCGCAACTACACGATGAACTTCGGCCCGCAGCACCCGGCTGCGCACGGCGTGCTGCGCCTGATCATGGAGATGGACGGCGAGACCATCGTGCGCGTCGATCCGCACGTGGGCCTGCTCCATCGCGGCACCGAAAAGCTGGCCGAGTCCAAGCCGTTCAACCAGTCGATCGGCTACATGGACCGGCTCGACTACGTGTCGATGATGTGCAACGAGCACGCCTACGTGCGCGCGATCGAGACTCTGCTGGGGATCGAGGCGCCGGAGCGCGCGCAGTACATCCGCACCATGTTCGACGAGATCACCCGCATCCTGAATCACCTGATGTGGATCGGCTCGAAC
PROTEIN sequence
Length: 118
MAQEIRNYTMNFGPQHPAAHGVLRLIMEMDGETIVRVDPHVGLLHRGTEKLAESKPFNQSIGYMDRLDYVSMMCNEHAYVRAIETLLGIEAPERAQYIRTMFDEITRILNHLMWIGSN