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SCNpilot_expt_500_bf_scaffold_4257_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(514..2301)

Top 3 Functional Annotations

Value Algorithm Source
arginine decarboxylase (EC:4.1.1.19) similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 468.0
  • Bit_score: 817
  • Evalue 2.70e-234
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 468.0
  • Bit_score: 817
  • Evalue 1.20e-233
Biosynthetic arginine decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 468.0
  • Bit_score: 819
  • Evalue 2.30e-234

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1788
ATGTCGAAGCCCTGGACCATTGCCACTGCCCGCCACACCTATGCCGTGCCCTACTGGAGCGACGGCTACGCCGACATCGATGCCGCCGGCAACCTGCTGATGCACCCGCGCGGCGCCGAGGGCCCGGCGCTGGCGCTGCCGGCGATCGTCGACCGCGCCTGCGCCGAGGGCCTGCGATTGCCGCTGCTGGTGCGTTTCCCGGACATCCTCGCCGACCGTCTCGCGCAGCTGCAGGGCGCCTTCGCCCGCGCCATCGCCGAGCACGACTACGCCGGAGGCTACACCGCGATCTATCCGATCAAGGTCAACCAGCAGCGCAGCGTGGCGGGCGAGCTGGTCGCCGCCGGCACCCAGGGCTTCGGCCTGGAAGCGGGCTCCAAGCCCGAGCTGATGGCGGTGCTGGCGATGGCGCGGCCCGGTTCCATCGTGATCTGCAACGGCTACAAGGACCGCGAGTACATCCGCCTGGCGCTGATCGGCAAGAAGCTCGGCCTGCGCGTGCACATCGTGATCGAGAAGCTGTCCGAACTCGACCACGTGTTCAGCGAGGCGAAGGCGCTGGGCGTGGAGCCGCTGCTCGGCGTGCGCGTGCGACTGGCCTCGATCGGCGCCGGCAAGTGGCAGAACACCGGCGGCGACAAGGGCAAGTTCGGACTGTCGCCGCAGCAGGTGCTGCGGCTGATCGAGCGGCTCGATGCGGCAGGCCTGAAGCACACGCTGAAGCTGCAGCACTTCCACATGGGCTCGCAGATCTCCAACGTGCGCGACATCGCCAACGGCATGCGCGAGGCCACCCGCTACTTCGTCGAACTCTCGCACATGGGCGTGCCGCTGGAGATCGTCGACGTCGGCGGCGGCCTGGGTGTGGATTACGAAGGCACCCGCTCGCGCAGCCACAACTCGATCAACTACTCGCTGGAACAGTACGCCGCCACCATCGTGCAGTCGCTGGCCGAGGCGGTGAGCGCCGAGGGCCTGGCCGCGCCGCACATCCTCACCGAGGCAGGCCGGGCGATGACCGCGCACCACGCGGTGATGGTGGTCAACGTGACCGAGGTCGAGCAGGTGCCGGCCGGCAGCATGCCGTCGCCGCGCGGGGACGAGCCGGTGGTGCTGCGCCACCTGCGCGAGGTCCACGCGGCGCTGGACGAGCGCCCGCCGCTGGAGCTGTTCCACGAGGCCCAGCATCACCTGGCCGAAGGGCAATCGCTGTACGCGCTGGGCCAGCTGTCGCTGGCCGACCGCGCGCGACTGGACGAGATGTTCTACGCCATCGCCAATGCCGTGCGCGGGCGCCTGCTGCCGGCCGAGCGCGCGCACCGACAGGTGCTGGACGAGCTGGACGAGAAGCTGGTGGACAAGTACTTCACCAACTTCTCGGTATTCGAATCGATCCCCGACGTGTGCCCGGCGCGGCGTGATCGTCGACCTCACCTGCGATTCGGACGGCCGCATCGACCACTACGTGGAGGCCGACGGCGTCGACGTCAGCCTGCCGCTGCATGCGCTGAAGGACGGCGAGAGCTATCGGCTGGGCATCTTCATGGTCGGCGCCTACCAGGAGACCCTGGGCGACATCCACAACCTGTTCGGCGACACCGACGCGGTCAACGTGCGCGTCGAGGGCGACGGCTACGTGTTCGCCAACAAGCGTCGCGGCGACACCACCGACCTGATGCTCGACTACGTCGGCTACGACCTGGAGGCCTTGCGCGCCAGCTACCGCGCGCGCATTGCCGACGCGGGCGTCGCCGGCGACGAGGCGGCGCGCCTGTACGATGCGCTTGA
PROTEIN sequence
Length: 596
MSKPWTIATARHTYAVPYWSDGYADIDAAGNLLMHPRGAEGPALALPAIVDRACAEGLRLPLLVRFPDILADRLAQLQGAFARAIAEHDYAGGYTAIYPIKVNQQRSVAGELVAAGTQGFGLEAGSKPELMAVLAMARPGSIVICNGYKDREYIRLALIGKKLGLRVHIVIEKLSELDHVFSEAKALGVEPLLGVRVRLASIGAGKWQNTGGDKGKFGLSPQQVLRLIERLDAAGLKHTLKLQHFHMGSQISNVRDIANGMREATRYFVELSHMGVPLEIVDVGGGLGVDYEGTRSRSHNSINYSLEQYAATIVQSLAEAVSAEGLAAPHILTEAGRAMTAHHAVMVVNVTEVEQVPAGSMPSPRGDEPVVLRHLREVHAALDERPPLELFHEAQHHLAEGQSLYALGQLSLADRARLDEMFYAIANAVRGRLLPAERAHRQVLDELDEKLVDKYFTNFSVFESIPDVCPARRDRRPHLRFGRPHRPLRGGRRRRRQPAAACAEGRRELSAGHLHGRRLPGDPGRHPQPVRRHRRGQRARRGRRLRVRQQASRRHHRPDARLRRLRPGGLARQLPRAHCRRGRRRRRGGAPVRCA*