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SCNpilot_expt_500_bf_scaffold_4257_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 2707..3360

Top 3 Functional Annotations

Value Algorithm Source
spermidine synthase (EC:2.5.1.16) similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 217.0
  • Bit_score: 430
  • Evalue 4.40e-118
Spermidine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 217.0
  • Bit_score: 430
  • Evalue 1.40e-117
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 217.0
  • Bit_score: 430
  • Evalue 2.00e-117

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGATGACCCACCCGGCGCTGTTCACCCACGCGCGCGCCAAGCGCGTGGTGATCATCGGCGGCGGCGATTGCGGCACGCTGCGCGAAGTGCTGCGCCACGAGGAAGTCGAGCACGCCGTGCAGGTGGAGATCGACGAGCGCGTGACGCGCCTGGCCGAACAGTATTTCCCCGAGCTGTGCGAGGCCAACGCCGATCCGCGCGCCGAGCTGCTGTTCATCGACGGCATCAAGTACATGGCCGAGTGCGAGCCGGAGTCGGTGGATCTGGTCATCGTCGACTCGACCGACCCGGTGGGCCCGGCGGAAGGCCTGTTCAACGCCGCGTTCTACGCCAGCTGCTACAAGGCGCTGCGCCACGGCGGCCTGCTGGTGCAGCAGAGCGAATCGCCGCTGGCCCACCTGGACCTGATCCGCTCGATGCGTTCGGCGATGCGCACCACCGGCTTCGCCGCGGTGAAGACGCTGCCGTTCCCGCAACCGTGCTACCCCACCGGCTGGTGGAGCTGCACCATGGCGCGCAAGGGCGGCGACCTCTCCGGCTTCCGCGAACGCGGCGCTTCAGCCAAGAAATTTCCCACCCGCTACTACAACGCCGAAATCCACAAGGCCGCCCTGGCCCAGCCGGAATTCATGCGCGAGGCGCTGGGGGACTGA
PROTEIN sequence
Length: 218
MMTHPALFTHARAKRVVIIGGGDCGTLREVLRHEEVEHAVQVEIDERVTRLAEQYFPELCEANADPRAELLFIDGIKYMAECEPESVDLVIVDSTDPVGPAEGLFNAAFYASCYKALRHGGLLVQQSESPLAHLDLIRSMRSAMRTTGFAAVKTLPFPQPCYPTGWWSCTMARKGGDLSGFRERGASAKKFPTRYYNAEIHKAALAQPEFMREALGD*