ggKbase home page

SCNpilot_expt_500_bf_scaffold_5274_28

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 22182..22739

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 185.0
  • Bit_score: 288
  • Evalue 8.00e-75
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 175.0
  • Bit_score: 285
  • Evalue 1.50e-74
Shikimate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ54_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 185.0
  • Bit_score: 290
  • Evalue 8.70e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGAATCCGTCGTGCAACCTGTTCATCGTCGGTCCGACCGGTGCCGGCAAGACCTCGGTCGGCAGGCGGCTCGCCGTGCATTATGGGCTCTCGTTCATCGATCTCGACCAGGAGGTCGAGCAGCATTGCGGCGTGGACGTGAGCACCGTGTTCGAGGTCGAGGGCGAAGCCGGCTTCCGCCAGCGCGAGAGCGCGCAGCTGGAAGCGCTGGGCCAGCGCTGCGGCATGCTGCTGGCGACCGGCGCGGGTGCCGTGCTGGCGAGCGACAACCGCCGCTGGCTGAGCCAGCGCGGTTTCGTGGTGTGGCTGCAGGCCAGCGTGGAGCAGCAACTCGAACGCCTCGAACGCGACCATCGTCGCCCGCTGCTGGCCGTGCCCGACCGCCTCGCGCGCCTGCAGGCGATGGCCAGCGTGCGCGAGCCGATCTACCGCGAACTTGCCGACCTCGCCGTGCCCGGCCACCATGGCAGTGTCGGCGCCGCCAGCGAGCGCTGCATTGCCCTGATCGATGCGCACTGGCAACGCGCCCCTCTTTCCTGTCCCCCGCACCACGCATGA
PROTEIN sequence
Length: 186
MNPSCNLFIVGPTGAGKTSVGRRLAVHYGLSFIDLDQEVEQHCGVDVSTVFEVEGEAGFRQRESAQLEALGQRCGMLLATGAGAVLASDNRRWLSQRGFVVWLQASVEQQLERLERDHRRPLLAVPDRLARLQAMASVREPIYRELADLAVPGHHGSVGAASERCIALIDAHWQRAPLSCPPHHA*