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SCNpilot_expt_500_bf_scaffold_5832_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3012..4496)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4W516_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 232.0
  • Bit_score: 392
  • Evalue 5.70e-106
  • rbh
ABC transporter permease {ECO:0000313|EMBL:EIL94557.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 232.0
  • Bit_score: 392
  • Evalue 8.00e-106
ABC-type uncharacterized transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 265.0
  • Bit_score: 349
  • Evalue 1.70e-93
  • rbh

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGCAGGCGGCCGGCGGTGTCGACGATCAGCACGTCGACCAGCTCGCGCCGCGCGGCGGCGATGGCGTCCCTGGCGATGCGCACCGGGTCCTGGCCCACCTCGGAGGGGAAGAACTTCACCCCGACCTGCCCGGCCAGCGTGCGCAGTTGCTGGATGGCGGCCGGACGATAGACATCGCAGCTGACCACCATCACTTTCTTCTTCTTGCGCTCGGTCAGCAGCCGCGCCAGCTTGGCGACCGTGGTGGTCTTGCCCGCGCCTTGCAGGCCAGCCATCAGCACCACCGCGGGCGGCTGCTGGGCCAGGTTCAATTCGGTGTTGGCGATGCCCATCACCATGGTCAGCTCATCGCTGACCACCTTCACCAGCGCCTGACCGGGCGACAGGCTGCGCGCCACTTCCTGGCCGACCGCGCGCACCTTGATGCGCTGGATCAGCGCCTGCACGACCGGCAAGGCCACATCCGCCTCCAGCAGCGCGATGCGCACTTCGCGCAGCGCTTCGCGGATGTTCTCGTCGGTCAGCCGGCCGCGACCGCGCAGTCGGTTGACGGTGGTGGCAAGGCGTTGGCTGAGCGACTCGAACATGGCGAAACCGGCGAACAGGAAAAGGATGATTATAGCGGACGGATCGATCGGCTCCCGCATGCAACCCGGCCGGGCCCTGTGCGACACTTCACCGTCATGCCGCTGACTCTTCCTTCCATTCTCGCCATCGCCCTCTACGCCGGCGGCGCCGCCTTGCTGGCTGCTCCGCTGACGGGTTGTCCGCGCTCGCCGCGGCGGCTCGGCCTGGCGACGGCAACGGTGGCGGTCCTGCTGCACGCAGCGGTCCTGCTGGGAGCGCATGGCGGCCGGCTCGACCTGCACTTCTTCGCCGCGCTGTCGCTGGTGGCCTGCGTGGTGGCTGCGCTGACCCTGCTGGTGAACCTGTCGCGACCGGTCGCCGGGCTGGGCGTGATCGTGTTTCCGCTGGCTGCACTGTTGCTGGCGCTGGACGTGTTCCTGGCGCCGCCGACCGTGCCCAGGCCCATGGACTGGCAGATCCAGTTGCACGTGGTGATCGCGCTGCTTGCCTACAGCGTGCTGTCCATCGCCGCGGTACTCGCCCTGCTGCTGGCGGTGCAGGAGCGCGCGCTGCGCGCGCGCCGGCCAGGCATGCTGGTTCGCGCCCTGCCGCCGCTGACCCAGACCGAAGCCTTGCTGTTTCGCCTGATCGGCGCCGGATTCGCGCTGCTCACCCTGACCTTGCTGAGCGGCTTCCTGTTCATCGCCAATATCCGTGCGCAACACCTCGTGCACACCACGGTGCTCAGCGTCGTGGCATGGCTGATCTTTGGGGCCTTGTTGTGGGGTCGCTGGCGCCATGGCTGGCGCGGGCGCAGCGCCGTCAACCTCACCCTGATCGGCATGGCGGTGCTGGGGCTGGCGTTCTTCGGCTCGAAATTCGTGCTGGAAGTGATCCTGCAGCGCACGATGGGCTGA
PROTEIN sequence
Length: 495
MQAAGGVDDQHVDQLAPRGGDGVPGDAHRVLAHLGGEELHPDLPGQRAQLLDGGRTIDIAADHHHFLLLALGQQPRQLGDRGGLARALQASHQHHRGRLLGQVQFGVGDAHHHGQLIADHLHQRLTGRQAARHFLADRAHLDALDQRLHDRQGHIRLQQRDAHFAQRFADVLVGQPAATAQSVDGGGKALAERLEHGETGEQEKDDYSGRIDRLPHATRPGPVRHFTVMPLTLPSILAIALYAGGAALLAAPLTGCPRSPRRLGLATATVAVLLHAAVLLGAHGGRLDLHFFAALSLVACVVAALTLLVNLSRPVAGLGVIVFPLAALLLALDVFLAPPTVPRPMDWQIQLHVVIALLAYSVLSIAAVLALLLAVQERALRARRPGMLVRALPPLTQTEALLFRLIGAGFALLTLTLLSGFLFIANIRAQHLVHTTVLSVVAWLIFGALLWGRWRHGWRGRSAVNLTLIGMAVLGLAFFGSKFVLEVILQRTMG*