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SCNpilot_expt_500_bf_scaffold_5832_18

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 14573..15427

Top 3 Functional Annotations

Value Algorithm Source
Phytoene/squalene synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5T9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 282.0
  • Bit_score: 444
  • Evalue 9.50e-122
  • rbh
Phytoene/squalene synthetase {ECO:0000313|EMBL:EIL94830.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 282.0
  • Bit_score: 444
  • Evalue 1.30e-121
phytoene/squalene synthetase similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 281.0
  • Bit_score: 438
  • Evalue 1.30e-120
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAGCGAACCAGCCGGGCAGAACGCGGTGTTGCAGGGCTTCATCGACAAATGGCTGGCCGCGCAGCCGCAGCAGCGCGTGGCGCTGGCCTTCGTCGACGGCCGCCGCCATCCGGGCCACGTGGCGCTGGCCGCGCTGGAGCAGGAGCTGCTGAGCGCGGCTTACGGCATCCGCGAGCCGCAGGTGGCCGCCGCCAAGCTCGGCTGGTGGGCGGAGGAACTGGCCGGTGCGGCGGCCAGCGGCGGGCGGCATCCGCTCACCCAGGTGCTGTTCGATGACGAACGCGCTCACGCGATCGCCACGGAGCTGTGGCTGGCGCCGGTATTGGCGGCGATGGCGCAGCTGGAGCAGGGCACGGCGGCCGATTACGCCGACCAACTGCAGGCGGCGATGCCGCTGCACGGTGCGCTGGCCGCACTGGAGACGGCATGGTGGTATGGCGCCGCGGCCTCGCCCGAGCGCGCGACCCGGGTGGCCGTGCTCAATCACTTGTTGCATGCCTTGTTGCACCTGGACGCAGACGCCGAACGCGACCGCCTGCCACTGCCGATGGCCCGGCTGGCACGCCACGGGCTGGATCGCGCGCAACTGCGCAAGCCTTGCGCACCGCGGCAGCAGGCGATCCGGGCGCAGCTGCAGGATTTGCTCGGCGACTGGCGCGCTGCCGATGCGCTGGGCGGGCCACTCAGCGTGTTCCGTGCACTCGAGTCGCGTCAGGCCTGCGCGCTGGCGCGCCGCGCGCTGCATGCCGACGAGGCACTGGCCGTGTTGCAGGCCGACTGGTCGCGCACGCCGTGGTCGACGCCGTGGCGGGCGTGGCAGGCCGCCCGTGCATGGCGGCGCCAGACACAGTAG
PROTEIN sequence
Length: 285
MSEPAGQNAVLQGFIDKWLAAQPQQRVALAFVDGRRHPGHVALAALEQELLSAAYGIREPQVAAAKLGWWAEELAGAAASGGRHPLTQVLFDDERAHAIATELWLAPVLAAMAQLEQGTAADYADQLQAAMPLHGALAALETAWWYGAAASPERATRVAVLNHLLHALLHLDADAERDRLPLPMARLARHGLDRAQLRKPCAPRQQAIRAQLQDLLGDWRAADALGGPLSVFRALESRQACALARRALHADEALAVLQADWSRTPWSTPWRAWQAARAWRRQTQ*