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SCNpilot_expt_500_bf_scaffold_7863_13

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(13253..13630)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB42_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 125.0
  • Bit_score: 235
  • Evalue 3.90e-59
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL96683.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 125.0
  • Bit_score: 235
  • Evalue 5.40e-59
ABC-type multidrug transport system, ATPase component similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 125.0
  • Bit_score: 228
  • Evalue 8.70e-58

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GACATCCTCTACCGCAAGCAGTTCTACCAGAACCTGCTGGAGGACTACTTCGACGAGAACAAGACCATCATCGTCACCACCCACCAGGTGGAGGAGGTCGAGCACATTCTCACCGACCTGATGTTCATCCGTGACGGCCGGATCGTGCTCGACGCGGACATGGACGCCGTGGGCGAGCGCTACATCGAGGTGATGGTCAACGCCGACCGGGCCGACGCGGCCCGGGCGCTGAAGCCGCTGGACGAACGCCAGGTCTTCGGCAAGAGCATCTTTCTGTTCGACGGTGTCGGACGCGCGCAACTGGAGGCGCTGGGCGAAACCCGCCGGCCATCCATCAGCGACCTGTTCGTCGCCACCATGAAGGGAACCTACGCATGA
PROTEIN sequence
Length: 126
DILYRKQFYQNLLEDYFDENKTIIVTTHQVEEVEHILTDLMFIRDGRIVLDADMDAVGERYIEVMVNADRADAARALKPLDERQVFGKSIFLFDGVGRAQLEALGETRRPSISDLFVATMKGTYA*