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SCNpilot_expt_500_bf_scaffold_7863

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7863_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26..2644
DNA (2619bp) protein (873aa)
TonB-dependent receptor, plug n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXD6_9GAMM rbh
TonB-dependent receptor, plug {ECO:0000313|EMBL:EIL91877.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor for ferrienterochelin and colicins rbh
SCNpilot_expt_500_bf_scaffold_7863_2
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2872..3195
DNA (324bp) protein (108aa)
Amidohydrolase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SZY6_XANCT
Amidohydrolase {ECO:0000313|EMBL:EYR70018.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7863_3
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3192..4250
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AUG2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAD58348.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
amidohydrolase
SCNpilot_expt_500_bf_scaffold_7863_4
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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4247..5566
DNA (1320bp) protein (440aa)
Imidazolonepropionase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCT3_PHEZH
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:GAK33981.1}; Flags: Precursor;; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
imidazolonepropionase
SCNpilot_expt_500_bf_scaffold_7863_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5785..6549)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W187_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93228.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Putative cytoplasmic protein (Fragment)
SCNpilot_expt_500_bf_scaffold_7863_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6681..8495)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXE0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91881.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_7863_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8599..9918)
DNA (1320bp) protein (440aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Adenylosuccinate lyase (EC:4.3.2.2) rbh
Adenylosuccinate lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW89_9GAMM rbh
SCNpilot_expt_500_bf_scaffold_7863_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10143..11270
DNA (1128bp) protein (376aa)
fumarase (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Fumarate hydratase class II n=1 Tax=Rhodanobacter denitrificans RepID=M4NG82_9GAMM
SCNpilot_expt_500_bf_scaffold_7863_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11216..11479
DNA (264bp) protein (88aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
fumarase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9P0_9GAMM
SCNpilot_expt_500_bf_scaffold_7863_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11622..12314)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNJ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88781.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7863_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12349..12927)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB41_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96682.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7863_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12885..13256)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB41_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96682.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7863_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13253..13630)
DNA (378bp) protein (126aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB42_9GAMM
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL96683.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type multidrug transport system, ATPase component
Displaying 13 items

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