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SCNpilot_expt_500_bf_scaffold_8295_15

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(10321..10581)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W017_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 86.0
  • Bit_score: 163
  • Evalue 9.80e-38
Major facilitator family transporter {ECO:0000313|EMBL:EIL92808.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 86.0
  • Bit_score: 163
  • Evalue 1.40e-37
arabinose efflux permease family protein similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 86.0
  • Bit_score: 153
  • Evalue 2.50e-35

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
AGCAGCTGGGTCGGCCGCCGCGCCGGCGCGGCGAAGGCGCAGGCCGCGTCGGTGTACCTGTTCTGCTATTACATGGGCTCCAGCATCGCCGGCGCCAGCGGCGGCCTGTTCTACGCCGCGCACGGCTGGGCCGGGGTGGCGCTGTTCGTCGGCGTGCTGGTGCTGCTCGGACTGCTGGTCGCGCTGTGGCTGTTCCGGCTGCCGCCGCTGGTCAATGTGGCGACCGCGCCGACGCCGATGAGCAAGGGCGCGATGGGGTGA
PROTEIN sequence
Length: 87
SSWVGRRAGAAKAQAASVYLFCYYMGSSIAGASGGLFYAAHGWAGVALFVGVLVLLGLLVALWLFRLPPLVNVATAPTPMSKGAMG*