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SCNpilot_expt_500_bf_scaffold_8388_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(989..2830)

Top 3 Functional Annotations

Value Algorithm Source
Di-and tricarboxylate transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVB7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 613.0
  • Bit_score: 1062
  • Evalue 0.0
Di-and tricarboxylate transporter {ECO:0000313|EMBL:EIL91158.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 613.0
  • Bit_score: 1062
  • Evalue 0.0
di-/tricarboxylate transporter similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 613.0
  • Bit_score: 1055
  • Evalue 0.0

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1842
ATGGGCCTGTCGCTCACCCCGGAAATGATCCTGGTGCTGGGCCTGGCGGGCTTCACCATGCTGATGCTGGTGCTGGACTGGATCCGCGCCGACATGGTGGCGCTGCTGGTGGTGGTGGCCATCGGCCTGATCGGGCTGATTCCCGCGGACAAGGTGTTCGACGGCTTCGCCGGCAACGCGGTGATCTCGATCATCGCCATCATGATCATGGGCGAAGGCCTGGATCGCGCCGGCGTGCTCACCTATACCGCGCGCGTCATGATGCGCATGGCCAACGGCGTGGAATCGCGCCTGAGCCTGGTCATCAACGTGGTGGCCAGCCTGTTCAGCGCGGTGATCCCCAGCCAGGCGCTGGCGGCCCTGATGATCCCGATCAGCAGCCGACTCGCCGCGCGCACCGGCGTACCCATCTCGCGGCTGCTGCTGCCGATGGCGTTCTGCATCTTCACCGCCACCAACACCACGCTGATCGCGAACTCGCCGCTGATCATCCTCAACGACCTGATCGCCAGCGCCAACCTCAACCTGCCGCCGGGCGCGCACACGATCCCCAAGTTCGGCCTGTTCAGTGTCACGCCGATAGGCCTGGTGCTGGCCGCGGTGGGCGTGGCCTATTTCTATTTCTTCGGACACAAGCTGTTGCCCGGGCACGAGGACGAACGCCTGAAGGTGACCCCCGGGCGCACCGAAAGCTACTTCGCCGAGACCTACGGCATCGGCGGCGAGACCGCCGAGCTCACCGTCACCGCGGAAAGCCCGCTGGTGGGCATGAGCATCGGCGAAGCCGAAGCGCTGCACCAGGCGCCATTGATCCTGGCGATCAAGAGCGGCAACGAGTCACGCATGGCGCCGCCGGCCGATCACGTGATCTGGGTCGGCTCGGTACTCGGTGTGCTCGGCCCGCGCGAGCAGTTGAACCGGTTCGCCAACAACCAGCTGTGCCGGCTGTCCACCCGCATGCGTCAGTTGGGCGAATTGTTCAACCCCACCCGCGCGGGCATTTCCGAAGTGGTGATTCCGCCGGTGTCGCGCTTCATCAAGCAGACCGTGGCCGACCTGCGCCTGCGCAAGCGCTTCGGCATCTCGGTGCTGGCGATTACCCGCGGCGACCAGGTGTTCCGCGACGACGTGCGCGGGGTCAGCCTGCGCGCCGGCGACACGGTGGTGCTGCACAGTAACTGGCGCGACCTGGCGCTGGCCGCCGAGGACAAGGACCTGGTCGTGGTCACCGACATCCCCAAGGAGGAGCAGCGCCCCGGCAAGATCTGGCAGGCGGTGGGTTTCTTCCTGATGGCGCAGGGGTTGGCGCTGTTCACTCCGCTCGACCTGTCGCTGTCGATGATGGCCGGCGCGATCGCGATGCTGCTGACCGGCGTGCTGAACATGGACGAGGCGTACAAGGCGATCAACTGGAAGACGATCTTCGTGGTCGCCTGCCTGATCCCGCTGGGCTGGTCGATGGACGCCACCGGCACCGCCGCCTGGCTTGCGCAGCTGGTGTTGACGCATCTTGGCGGCGTCGCGCCGTGGGTGCTGCAACTGTGCGTGGCGTTGCTCACCCTGCTCTTTGCCCAGGTGATGTCCAACGTGGGCGCCACCGTGATGATGGTGCCGGTGGCGATCAGCGTGGCGGTGGCCACCGGCGCCAATCCGGCGGCCTATGCGCTGATCGTGGCGGTGTCCTCCTCCAACACCTTCCTGATCAGCGCCGGCCACCCCGCGCTGATGATGGTCACCGGCCCCGGTGGCTACAAGGGCAAGGATTTCCTGCGCGTCGGCGCGCCGCTGACGGTTCTGATGCTGGTGGCGACGCTGCTGATGGTGAACCTGATGTTCCGCTGA
PROTEIN sequence
Length: 614
MGLSLTPEMILVLGLAGFTMLMLVLDWIRADMVALLVVVAIGLIGLIPADKVFDGFAGNAVISIIAIMIMGEGLDRAGVLTYTARVMMRMANGVESRLSLVINVVASLFSAVIPSQALAALMIPISSRLAARTGVPISRLLLPMAFCIFTATNTTLIANSPLIILNDLIASANLNLPPGAHTIPKFGLFSVTPIGLVLAAVGVAYFYFFGHKLLPGHEDERLKVTPGRTESYFAETYGIGGETAELTVTAESPLVGMSIGEAEALHQAPLILAIKSGNESRMAPPADHVIWVGSVLGVLGPREQLNRFANNQLCRLSTRMRQLGELFNPTRAGISEVVIPPVSRFIKQTVADLRLRKRFGISVLAITRGDQVFRDDVRGVSLRAGDTVVLHSNWRDLALAAEDKDLVVVTDIPKEEQRPGKIWQAVGFFLMAQGLALFTPLDLSLSMMAGAIAMLLTGVLNMDEAYKAINWKTIFVVACLIPLGWSMDATGTAAWLAQLVLTHLGGVAPWVLQLCVALLTLLFAQVMSNVGATVMMVPVAISVAVATGANPAAYALIVAVSSSNTFLISAGHPALMMVTGPGGYKGKDFLRVGAPLTVLMLVATLLMVNLMFR*