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SCNpilot_expt_500_bf_scaffold_8388

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8388_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..169)
DNA (168bp) protein (56aa)
Putative DMT superfamily transporter inner membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W279_9GAMM
DMT(drug/metabolite transporter) superfamily permease
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_8388_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(233..511)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_8388_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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589..960
DNA (372bp) protein (124aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W277_9GAMM
Rieske (2Fe-2S) iron-sulfur domain-containing protein {ECO:0000313|EMBL:EIL93568.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
SCNpilot_expt_500_bf_scaffold_8388_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(989..2830)
DNA (1842bp) protein (614aa)
Di-and tricarboxylate transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVB7_9GAMM
Di-and tricarboxylate transporter {ECO:0000313|EMBL:EIL91158.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
di-/tricarboxylate transporter
SCNpilot_expt_500_bf_scaffold_8388_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3223..3852)
DNA (630bp) protein (210aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVB9_9GAMM
SCNpilot_expt_500_bf_scaffold_8388_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4014..6152)
DNA (2139bp) protein (713aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Rhodanobacter denitrificans RepID=M4NJW0_9GAMM
Fe2+-dicitrate sensor, membrane component
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:AGG90377.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_8388_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6483..6959
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSY0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02572.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8388_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6956..7219
DNA (264bp) protein (88aa)
Probable alpha-L-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_01552}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_01552};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Ribosomal protein S6 modification protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS38_9GAMM
alpha-L-glutamate ligase, RimK family
Displaying 8 items

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