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SCNpilot_expt_500_bf_scaffold_11120_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(4501..5172)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radc n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 223.0
  • Bit_score: 413
  • Evalue 1.80e-112
  • rbh
DNA repair protein radc {ECO:0000313|EMBL:EIL89172.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 223.0
  • Bit_score: 413
  • Evalue 2.60e-112
DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 223.0
  • Bit_score: 408
  • Evalue 1.10e-111
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGAGCATCCGCGACTGGCCCGAAGGCGAACGACCCCGCGAAAAACTGCTGGCCCGCGGGAGCGCCGCGCTGTCCGACGCGGAGCTGCTGGCCGTGCTGCTGGGCAGCGGCAGCCGCGGCAAGGACGCCATCGCGCTGGGCCGCGAACTGCTCGCCAACGCGGGCGGCGTGGCTGCCTTGCTGGGCCGGCCGGAGCAGCAGATCCGCGCCGGCGGGCTGGGTCCGGCCAAGCGCGCGCGGATCGCCGCAGCGCTGGAACTGGCGCGGCGCAGCCTGGCCGAGCAGCTGCAGGAGCGGCCCAGCCTGGGCAACCCGCGCGACAGCGGCGACTACCTGCGGGCCCGCCTGCGCCACCTGCCCTACGAAGTGTTCGGCTGCCTGTACCTGGACAACCGCCATCGCGTGCTGGCCTTCGAGGAGCTGTTCCGCGGCACCGTCGACGGCGCCAGCGTGCACCCGCGTGAAGTGGTGCGCGCATGTCTGCATCACAACGCCTGCGCGGTGATCTTCGCCCACAACCACCCCTCCGGCGTGGCCGAACCCAGTGCCGCCGACCGCGCGATCACCCACGAACTGCGTGATGCCCTGCACCTGGTCGGCGTGCGCGTGCTCGACCACCTGGTGATCGGCCACGGCGAGCCGGTGTCGATGGCCGCCCGCGGCCTGCTCTGA
PROTEIN sequence
Length: 224
MSIRDWPEGERPREKLLARGSAALSDAELLAVLLGSGSRGKDAIALGRELLANAGGVAALLGRPEQQIRAGGLGPAKRARIAAALELARRSLAEQLQERPSLGNPRDSGDYLRARLRHLPYEVFGCLYLDNRHRVLAFEELFRGTVDGASVHPREVVRACLHHNACAVIFAHNHPSGVAEPSAADRAITHELRDALHLVGVRVLDHLVIGHGEPVSMAARGLL*