ggKbase home page

SCNpilot_expt_500_bf_scaffold_11120

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_11120_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1092
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKV8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87849.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein; K07001 NTE family protein
SCNpilot_expt_500_bf_scaffold_11120_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1105..1860)
DNA (756bp) protein (252aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN4_9GAMM rbh
Putative oxidoreductase {ECO:0000313|EMBL:EIL89175.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
short-chain alcohol dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_11120_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1865..2272)
DNA (408bp) protein (136aa)
Cell division protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBY4_9GAMM
Cell division protein {ECO:0000313|EMBL:EIL96975.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cell division protein
SCNpilot_expt_500_bf_scaffold_11120_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2487..3701)
DNA (1215bp) protein (405aa)
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Arginine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW8_9GAMM
SCNpilot_expt_500_bf_scaffold_11120_5
unknown

Not on your lists

3791..4687
DNA (897bp) protein (299aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_11120_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4501..5172)
DNA (672bp) protein (224aa)
DNA repair protein radc n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN1_9GAMM rbh
DNA repair protein radc {ECO:0000313|EMBL:EIL89172.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA repair protein rbh
SCNpilot_expt_500_bf_scaffold_11120_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5820..6416
DNA (597bp) protein (199aa)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase {ECO:0000313|EMBL:EIL96972.1}; EC=6.3.2.5 {ECO:0000313|EMBL:EIL96972.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBY1_9GAMM
SCNpilot_expt_500_bf_scaffold_11120_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6413..6871
DNA (459bp) protein (153aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBY0_9GAMM
SCNpilot_expt_500_bf_scaffold_11120_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6943..9300
DNA (2358bp) protein (786aa)
Phosphomannomutase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW4_9GAMM
phosphomannomutase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_11120_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9258..9863)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLF6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90902.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_11120_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9990..10685)
DNA (696bp) protein (232aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Orotate phosphoribosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NTU6_9GAMM
orotate phosphoribosyltransferase
Displaying 11 items

View Taxonomy