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SCNpilot_expt_500_bf_scaffold_9779_12

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(11771..12412)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid permease n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MES8_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 213.0
  • Bit_score: 316
  • Evalue 1.70e-83
Aspartate:proton symporter {ECO:0000313|EMBL:KDP88412.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 213.0
  • Bit_score: 317
  • Evalue 1.80e-83
amino acid permease-associated protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 213.0
  • Bit_score: 304
  • Evalue 2.80e-80

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Taxonomy

Cupriavidus sp. SK-3 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGAACGCCACGCCTCGCGTGGTCTACGGCTGGGCACGCAGTGGCTCGTTCTTCAAGCTGTTCGCGCGCGTCGATGCCGACTCCGGCATCCCGCGCCCCGCGCTGTGGCTGAGCTTTGCGCTGTCGGTGTTCTGGACCTTGCCGTTTCCTTCGTGGGAAGCACTGATCAGCGTGGTGTCGGCGGCCCTGGTGCTGAGCTATGCCGTGGCGCCGATCACCGTGGCCGCCCTGCGCCGCACCGCACCGGAACTGCCGCGACCGTTCCTGGTACGTGGCTTCGGCCTGCTCGGGCCGCTCTCCTTCATGGTGGCTACCCTGATCGTGTACTGGTCGAGCTGGCAAACCGTGTCATGGCTGCTGGGCCTGCAGATCGTGCTGTTCGCGATCCATGTCCTGTGCAGGCTGCCGTCGCCCGAAGGCCGCTCCGGGCTGCGCCAGGAGGTGTATTCGTCGTGGTGGCTGGTCGCCTACTACGCGCTGCTCATTGCGTTGTCCTGCCTGGGCAGCTTCGGCGGCAGCAACCTCCTCGGCCATCCCTGGGATTCGCTGGCCGCCACCGTCGTGGCGCTGCTCATCTACCACTGGGGCGCGCGCAGCGGACTGCCGGCCCACTTGCTCGACCTGGGCCGCGATGACGACTGA
PROTEIN sequence
Length: 214
MNATPRVVYGWARSGSFFKLFARVDADSGIPRPALWLSFALSVFWTLPFPSWEALISVVSAALVLSYAVAPITVAALRRTAPELPRPFLVRGFGLLGPLSFMVATLIVYWSSWQTVSWLLGLQIVLFAIHVLCRLPSPEGRSGLRQEVYSSWWLVAYYALLIALSCLGSFGGSNLLGHPWDSLAATVVALLIYHWGARSGLPAHLLDLGRDDD*