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SCNpilot_expt_500_bf_scaffold_9779

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_9779_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..216
DNA (216bp) protein (72aa)
HAD superfamily hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQE5_9GAMM
putative HAD superfamily hydrolase
Putative HAD superfamily hydrolase {ECO:0000313|EMBL:AGG87636.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_9779_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(263..517)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ06_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92447.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_9779_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(597..2555)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ05_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92446.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_9779_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2842..3873
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ03_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92444.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_expt_500_bf_scaffold_9779_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3977..4471
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ02_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92443.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative toxin-antitoxin system toxin component, PIN family
SCNpilot_expt_500_bf_scaffold_9779_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4528..4716
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ01_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92442.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_9779_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5223..5849
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH48_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98789.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_9779_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6187..6807
DNA (621bp) protein (207aa)
Collagenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ8_9GAMM
Collagenase {ECO:0000313|EMBL:EIL92439.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
S1A family peptidase
SCNpilot_expt_500_bf_scaffold_9779_9
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7054..9993
DNA (2940bp) protein (980aa)
SC10A5.17; protease; K01387 microbial collagenase [EC:3.4.24.3]
Microbial collagenase, secreted n=2 Tax=Streptomyces lividans RepID=S1SJF4_STRLI
Protease {ECO:0000313|EMBL:AIJ12816.1}; TaxID=457428 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
SCNpilot_expt_500_bf_scaffold_9779_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10118..10402
DNA (285bp) protein (95aa)
Integrase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLE1_9GAMM
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AGG88546.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_9779_11
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10993..11205
DNA (213bp) protein (71aa)
AraC family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U3J1_MYXSD
AraC family transcriptional regulator {ECO:0000313|EMBL:KFN19227.1}; Flags: Fragment;; TaxID=645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida.;"
AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_9779_12
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11771..12412)
DNA (642bp) protein (214aa)
Amino acid permease n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MES8_PSEPS
Aspartate:proton symporter {ECO:0000313|EMBL:KDP88412.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
amino acid permease-associated protein
SCNpilot_expt_500_bf_scaffold_9779_13
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12417..13202
DNA (786bp) protein (262aa)
Putative amino acid permease {ECO:0000313|EMBL:KGD58110.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;"
SCNpilot_expt_500_bf_scaffold_9779_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13395..14207)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031A4C6F
Uncharacterized protein {ECO:0000313|EMBL:AHX14141.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
Displaying 14 items

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