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SCNpilot_expt_500_bf_scaffold_16232_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 3496..3744

Top 3 Functional Annotations

Value Algorithm Source
Probable transcriptional regulatory protein UUA_11091 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGT3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 82.0
  • Bit_score: 144
  • Evalue 4.50e-32
Probable transcriptional regulatory protein UUA_11091 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 82.0
  • Bit_score: 144
  • Evalue 6.30e-32
DNA-binding regulatory protein, YebC/PmpR family similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 80.0
  • Bit_score: 134
  • Evalue 1.90e-29

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
GTGATCAACGAGCACGGCGAGAGCATCGTGCTGTGCGCGCCGGAGCACTTCGAGGCGGTGCAGCAGGCCCTGATCGACGCCGGCCTCAACGCCGTGCACGCCGGCGTGGTGATGCGCCCGAACAATCGCGTCGAGGTGCCGGCGGAAGCGCTGGAGGCGCTGCTCGACCTGCTCGAGAAGCTCGATGCGCTGGACGACGTGAGCGAGGTCTCGCACAACGCCCTGCTGCCCGCCGGGACGGCCGAATAA
PROTEIN sequence
Length: 83
VINEHGESIVLCAPEHFEAVQQALIDAGLNAVHAGVVMRPNNRVEVPAEALEALLDLLEKLDALDDVSEVSHNALLPAGTAE*