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SCNpilot_expt_500_bf_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_366_1
unknown

Not on your lists

2..190
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_366_2
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(125..670)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C5970
Gliding motility-associated lipoprotein GldH {ECO:0000313|EMBL:AKD03261.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
gliding motility-associated lipoprotein GldH
SCNpilot_expt_500_bf_scaffold_366_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(663..1541)
DNA (879bp) protein (293aa)
YicC domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PII5_CHIPD
hypothetical protein
YicC domain protein {ECO:0000313|EMBL:ACU58174.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_366_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1608..2507
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003198C10
Uncharacterized protein {ECO:0000313|EMBL:EFK59466.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_366_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2605..3240)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364EB3F
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B
SCNpilot_expt_500_bf_scaffold_366_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3437..3910
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSP3_CHIPD
hypothetical protein; K09776 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64492.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_366_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3920..4555)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BB487
Metallo-beta-lactamase {ECO:0000313|EMBL:KIC89187.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
beta-lactamase domain-containing protein
SCNpilot_expt_500_bf_scaffold_366_8
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5125..6603
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EFCE5 rbh
Integrase family protein {ECO:0000313|EMBL:CDT07340.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
integrase family protein rbh
SCNpilot_expt_500_bf_scaffold_366_9
unknown

Not on your lists

6618..6860
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_366_10
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6864..7613
DNA (750bp) protein (250aa)
metallophosphoesterase; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16]
Ser/Thr phosphatase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0W9_9FLAO rbh
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFK36145.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCNpilot_expt_500_bf_scaffold_366_11
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7835..8452
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:ETZ20926.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SCNpilot_expt_500_bf_scaffold_366_12
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8486..9025
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FT38_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI93872.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
SCNpilot_expt_500_bf_scaffold_366_13
unknown

Not on your lists

9089..9304
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_366_14
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9460..13098
DNA (3639bp) protein (1213aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB78924.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
SCNpilot_expt_500_bf_scaffold_366_15
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13301..17365)
DNA (4065bp) protein (1355aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDS5_9SPHI
Tax=RBG_13_Deltaproteobacteria_43_22_curated
SCNpilot_expt_500_bf_scaffold_366_16
unknown

Not on your lists

17764..18123
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_366_17
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18187..20151)
DNA (1965bp) protein (655aa)
TRAG family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBX4_9SPHI
Type IV secretory pathway VirD4 components-like protein {ECO:0000313|EMBL:CDT07391.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
type IV secretory pathway VirD4 components-like protein
SCNpilot_expt_500_bf_scaffold_366_18
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20170..21450)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363C59E
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:CDT07400.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
relaxase/mobilization nuclease
SCNpilot_expt_500_bf_scaffold_366_19
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21438..21827)
DNA (390bp) protein (130aa)
Mobilization protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBX2_9SPHI
Mobilization protein {ECO:0000313|EMBL:CDT07410.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_366_20
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22027..22911)
DNA (885bp) protein (295aa)
DNA primase {ECO:0000313|EMBL:CDT07415.1}; EC=2.7.7.- {ECO:0000313|EMBL:CDT07415.1};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
DNA primase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002E90517
DNA primase
SCNpilot_expt_500_bf_scaffold_366_21
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23058..23324
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003735665
Uncharacterized protein {ECO:0000313|EMBL:CDT29361.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
SCNpilot_expt_500_bf_scaffold_366_22
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23711..25153
DNA (1443bp) protein (481aa)
Uncharacterized protein {ECO:0000313|EMBL:CDT29352.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
Uncharacterized protein id=4045653 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_expt_500_bf_scaffold_366_23
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25228..27522)
DNA (2295bp) protein (765aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJM8_FLUTR
Uncharacterized protein {ECO:0000313|EMBL:CDT29342.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
PKD domain-containing protein
SCNpilot_expt_500_bf_scaffold_366_24
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27545..30322)
DNA (2778bp) protein (926aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R348_OWEHD rbh
Uncharacterized protein {ECO:0000313|EMBL:CDT29333.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_366_25
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30477..32009
DNA (1533bp) protein (511aa)
Uncharacterized protein {ECO:0000313|EMBL:CDS93665.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
Putative uncharacterized protein id=3690350 bin=GWF2_Bacteroidetes_33_16 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
SCNpilot_expt_500_bf_scaffold_366_26
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32021..33814)
DNA (1794bp) protein (598aa)
ParB-like partition protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDT4_9SPHI rbh
Putative ParB-like partition protein {ECO:0000313|EMBL:CDS93666.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
partitioning protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_500_bf_scaffold_366_27
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33897..34346)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y145_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDS93669.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_366_28
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34452..34709)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I6L8_MYCRH
Uncharacterized protein {ECO:0000313|EMBL:CDS93670.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
SCNpilot_expt_500_bf_scaffold_366_29
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34751..35578)
DNA (828bp) protein (276aa)
Uncharacterized protein {ECO:0000313|EMBL:AIM37400.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
SCNpilot_expt_500_bf_scaffold_366_30
unknown

Not on your lists

comp(35834..36088)
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying items 1-30 of 91 in total

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