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SCNpilot_expt_500_bf_scaffold_703

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_703_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..805)
DNA (804bp) protein (268aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niabella soli DSM 19437 RepID=H1NMY4_9SPHI rbh
Secretion protein HylD {ECO:0000313|EMBL:AHF15421.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RND family efflux transporter MFP subunit
SCNpilot_expt_500_bf_scaffold_703_2
unknown

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927..1241
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_703_3

Not on your lists

1500..2294
DNA (795bp) protein (265aa)
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase (Fragment) n=1 Tax=uncultured bacterium RepID=F8UVU6_9BACT rbh
Thymidylate synthase {ECO:0000313|EMBL:AEI30214.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_bf_scaffold_703_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2332..2844
DNA (513bp) protein (171aa)
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFU1_CHIPD
isoleucine patch superfamily carbonic anhydrase/acetyltransferase
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein {ECO:0000313|EMBL:ACU57924.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_703_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3034..3681
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036331C5
Phosphate transport regulator {ECO:0000313|EMBL:KIC92392.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
putative phosphate transport regulator; K07220 hypothetical protein
SCNpilot_expt_500_bf_scaffold_703_6
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3744..5141
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003696F1A
Phosphate transporter {ECO:0000313|EMBL:KDN54043.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
phosphate transporter; K03306 inorganic phosphate transporter, PiT family
SCNpilot_expt_500_bf_scaffold_703_7
unknown

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5619..5765
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_703_8
unknown

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5762..6073
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_703_9
unknown

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6122..6301
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_703_10
unknown

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comp(6264..6455)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_703_11
unknown

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comp(6455..6589)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_703_12
Muricauda lutaonensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6589..7512)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FLG0_FLAJ1 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKA35634.1}; TaxID=516051 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda lutaonensis.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_703_13
unknown

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7666..7959
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_703_14
unknown

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comp(7928..8083)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_703_15
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8360..8767
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VXG2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF73338.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_703_16
unknown

Not on your lists

comp(8757..8993)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_703_17
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9046..9939)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC67_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59450.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_703_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10014..10739
DNA (726bp) protein (242aa)
shikimate dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate dehydrogenase substrate binding domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUC7_CHIPD
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:ACU59167.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_703_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10798..12291
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIN2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58221.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_703_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12491..14329
DNA (1839bp) protein (613aa)
Membrane protein insertase YidC n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMB0_CHIPD
hypothetical protein; K03217 preprotein translocase subunit YidC
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_703_21
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14440..15453)
DNA (1014bp) protein (338aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF09768.1}; Flags: Fragment;; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
SCNpilot_expt_500_bf_scaffold_703_22
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15444..17702)
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Prevotella melaninogenica D18 RepID=D3I6R9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFC18410.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_703_23
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17723..18223)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CLU6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL74229.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_703_24
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18263..18982)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CLU8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF12868.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein
Displaying 24 items

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