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SCNpilot_expt_500_bf_scaffold_705

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_705_1
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..177
DNA (177bp) protein (59aa)
DNA-binding protein HU-beta n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z1M0_EUBE2
Histone family protein DNA-binding protein {ECO:0000313|EMBL:KGE16173.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
DNA-binding protein HU-beta; K03530 DNA-binding protein HU-beta
SCNpilot_expt_500_bf_scaffold_705_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(386..661)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4Z6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK35185.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCNpilot_expt_500_bf_scaffold_705_3
unknown

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comp(1381..2448)
DNA (1068bp) protein (356aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2778..4307)
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VST0_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92902.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_500_bf_scaffold_705_5
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4698..5354
DNA (657bp) protein (219aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2Q6_SPHS2
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADZ80735.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_705_6
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5354..7276
DNA (1923bp) protein (641aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2Q5_SPHS2
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADZ80734.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_705_7
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7317..7925)
DNA (609bp) protein (203aa)
nucleoside phosphorylase-like protein; K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9]
Nucleoside phosphorylase-like protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FEW2_FLAJ1
Contig_75, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ14464.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
SCNpilot_expt_500_bf_scaffold_705_8
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8082..9047)
DNA (966bp) protein (322aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
2-dehydropantoate 2-reductase n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MTX0_9SPHI
SCNpilot_expt_500_bf_scaffold_705_9
unknown

Not on your lists

comp(9189..9293)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_10
unknown

Not on your lists

comp(9293..9532)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_11
unknown

Not on your lists

9721..10167
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_12
unknown

Not on your lists

comp(10200..10313)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10361..11635
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRQ5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33288.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_705_14
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11834..12481)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E8489
MgtC family protein; K07507 putative Mg2+ transporter-C (MgtC) family protein
MgtC family protein {ECO:0000313|EMBL:ACU07142.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_expt_500_bf_scaffold_705_15
unknown

Not on your lists

comp(12687..12968)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_16
unknown

Not on your lists

12999..14699
DNA (1701bp) protein (567aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_17
unknown

Not on your lists

15022..16722
DNA (1701bp) protein (567aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_18
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17057..17563
DNA (507bp) protein (169aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RS67_LEAB4
Uncharacterized protein {ECO:0000313|EMBL:AIM37210.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
pyridoxamine 5'-phosphate oxidase-related fmN-binding protein
SCNpilot_expt_500_bf_scaffold_705_19
unknown

Not on your lists

17635..17898
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_20
unknown

Not on your lists

comp(17920..18030)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_21
unknown

Not on your lists

comp(18048..18200)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_22
unknown

Not on your lists

comp(18402..18653)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_23
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19326..20300
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003826CA4
Uncharacterized protein {ECO:0000313|EMBL:KFC20187.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_705_24
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21021..21752)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00035F9AC0
Uncharacterized protein {ECO:0000313|EMBL:KIA92356.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
LytTR family two component transcriptional regulator
SCNpilot_expt_500_bf_scaffold_705_25
unknown

Not on your lists

22312..22947
DNA (636bp) protein (212aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_705_26
unknown

Not on your lists

23309..24523
DNA (1215bp) protein (405aa)

This feature has no annotations

Displaying 26 items

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