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SCNpilot_expt_500_bf_scaffold_789

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_789_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..877
DNA (876bp) protein (292aa)
MATE efflux family protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C176_SPHS2
Multidrug transporter MATE {ECO:0000313|EMBL:KIC93789.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
MATE efflux family protein; K03327 multidrug resistance protein, MATE family
SCNpilot_expt_500_bf_scaffold_789_2
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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883..1869
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000361C635
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG58878.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
SCNpilot_expt_500_bf_scaffold_789_3
unknown

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1992..2372
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2384..3292
DNA (909bp) protein (303aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
beta-lactamase domain-containing protein; K00784 ribonuclease Z [EC:3.1.26.11]
Ribonuclease Z n=1 Tax=Niabella soli DSM 19437 RepID=H1NRY9_9SPHI
SCNpilot_expt_500_bf_scaffold_789_5
unknown

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3471..3593
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_6
unknown

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3719..3931
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_7
unknown

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comp(3935..4411)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_8
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4855..6528
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DYF0_PSEMN rbh
hypothetical protein rbh
Tax=RBG_13_Deltaproteobacteria_61_14_curated
SCNpilot_expt_500_bf_scaffold_789_9
unknown

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comp(6679..6774)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_10
unknown

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6847..7434
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_11
unknown

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7474..7884
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_12
unknown

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7990..8409
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_13
unknown

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8582..8977
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_14
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9619..10080
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Myroides odoratimimus RepID=H1GLS7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO08506.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
thioesterase superfamily protein
SCNpilot_expt_500_bf_scaffold_789_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10195..11484
DNA (1290bp) protein (430aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F3698
X-Pro aminopeptidase {ECO:0000313|EMBL:KIC90441.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_500_bf_scaffold_789_16
unknown

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11503..11850
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_17
unknown

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comp(12258..13031)
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_789_18
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13901..15142
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8QZU3_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:KGE88689.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_789_19
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15154..15555
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:AKD04147.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
Putative uncharacterized protein id=3542211 bin=GWF2_Bacteroidetes_41_31 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_expt_500_bf_scaffold_789_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15736..16581
DNA (846bp) protein (282aa)
TonB family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRN3_CHIPD
TonB family protein; K03832 periplasmic protein TonB
TonB family protein {ECO:0000313|EMBL:ACU58926.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_789_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16642..17397)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003608AE6
Uncharacterized protein {ECO:0000313|EMBL:KIC90022.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
Displaying 21 items

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