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SCNpilot_expt_500_bf_scaffold_1163

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1163_1
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2..3679
DNA (3678bp) protein (1226aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000363270B
Uncharacterized protein {ECO:0000313|EMBL:BAP32507.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
putative adhesin
SCNpilot_expt_500_bf_scaffold_1163_2
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3945..4910
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000363270B
Uncharacterized protein {ECO:0000313|EMBL:KHJ38828.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1163_3
unknown

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comp(4825..5181)
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1163_4
unknown

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5382..5474
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1163_5
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5569..7425
DNA (1857bp) protein (619aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2Q5_SPHS2
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADZ80734.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_1163_6
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7678..10116
DNA (2439bp) protein (813aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H0S3_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ24341.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
ATPase rbh
SCNpilot_expt_500_bf_scaffold_1163_7
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10300..10605
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KHJ37993.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SCNpilot_expt_500_bf_scaffold_1163_8
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11080..12441
DNA (1362bp) protein (454aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUT4_PEDHD rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KEQ29666.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
sigma-54 factor interaction domain-containing protein; K07713 two-component system, NtrC family, response regulator HydG rbh
SCNpilot_expt_500_bf_scaffold_1163_9
unknown

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12422..13177
DNA (756bp) protein (252aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1163_10
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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13342..15345
DNA (2004bp) protein (668aa)
Adenylate cyclase n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XQV6_9BACT
Adenylate cyclase {ECO:0000313|EMBL:EMS30922.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
adenylate/guanylate cyclase with GAF sensor(s)
SCNpilot_expt_500_bf_scaffold_1163_11
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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15439..17421
DNA (1983bp) protein (661aa)
Adenylate/guanylate cyclase catalytic domain protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UWB6_9LEPT
Adenylate/guanylate cyclase catalytic domain protein {ECO:0000313|EMBL:EPG64302.1}; TaxID=1193069 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar Khorat str. Khorat-H2.;"
adenylate/guanylate cyclase with GAF sensor(s)
SCNpilot_expt_500_bf_scaffold_1163_12
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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17469..18050
DNA (582bp) protein (194aa)
Metal-dependent phosphohydrolase HD sub domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTB7_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KFE98033.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
metal-dependent phosphohydrolase HD sub domain-containing protein
SCNpilot_expt_500_bf_scaffold_1163_13
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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18434..18931
DNA (498bp) protein (166aa)
Metal dependent phosphohydrolase n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RUX5_LEAB4
Membrane protein {ECO:0000313|EMBL:KFE97910.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
metal dependent phosphohydrolase
SCNpilot_expt_500_bf_scaffold_1163_14
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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18951..19463
DNA (513bp) protein (171aa)
flavonol synthase n=1 Tax=Empedobacter brevis RepID=UPI000377B25A
Flavonol synthase {ECO:0000313|EMBL:KGO86886.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
putative oxidoreductase; K06892
Displaying 14 items

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