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SCNpilot_expt_500_bf_scaffold_1818

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1818_1
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(124..1518)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036E61B9
Uncharacterized protein {ECO:0000313|EMBL:KEY18366.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_expt_500_bf_scaffold_1818_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1544..2422)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CET4_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:GAO45511.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein; K08994 putative membrane protein
SCNpilot_expt_500_bf_scaffold_1818_3
unknown

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comp(2827..3135)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1818_4
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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4339..4476
DNA (138bp) protein (46aa)
Tax=GWA2_Bacteroidetes_31_9b_curated
SCNpilot_expt_500_bf_scaffold_1818_5
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4737..6365)
DNA (1629bp) protein (543aa)
glutamate synthase n=1 Tax=Niabella aurantiaca RepID=UPI000379327D rbh
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:EHQ44191.1}; Flags: Precursor;; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
ferredoxin-dependent glutamate synthase rbh
SCNpilot_expt_500_bf_scaffold_1818_6
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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6642..7778
DNA (1137bp) protein (379aa)
Tetratricopeptide repeat family protein id=2089096 bin=GWE2_Bacteroidetes_42_42 species=unidentified eubacterium SCB49 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_expt_500_bf_scaffold_1818_7
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

8074..8529
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TMI7_MARTH
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_expt_500_bf_scaffold_1818_8
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8628..9056
DNA (429bp) protein (143aa)
PhnB protein n=1 Tax=Algoriphagus machipongonensis RepID=A3I189_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFC60541.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1818_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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9071..9628
DNA (558bp) protein (186aa)
Bifunctional deaminase-reductase domain protein id=4401826 bin=GWF2_Bacteroidetes_40_13 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
bifunctional deaminase-reductase domain-containing protein
Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_expt_500_bf_scaffold_1818_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9677..10327
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6H9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96824.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_1818_11
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10341..11339
DNA (999bp) protein (333aa)
metallophosphoesterase; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16] rbh
Metallophosphoesterase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA42_FLUTR rbh
Metallophosphoesterase {ECO:0000313|EMBL:AEA45219.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_500_bf_scaffold_1818_12
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11835..13049
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VN83_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57380.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
transglutaminase rbh
SCNpilot_expt_500_bf_scaffold_1818_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13163..13642
DNA (480bp) protein (160aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T934_NIAKG
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACU61852.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_1818_14
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13733..14500
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G424_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIA90200.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_expt_500_bf_scaffold_1818_15
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14532..14801
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF07555.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
SCNpilot_expt_500_bf_scaffold_1818_16
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

14982..15269
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000370648C
rRNA adenine methyltransferase {ECO:0000313|EMBL:KIY10569.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
rifampin ADP-ribosyl transferase
SCNpilot_expt_500_bf_scaffold_1818_17
unknown

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15311..15733
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1818_18
unknown

Not on your lists

15787..16182
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1818_19
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16263..16409
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGD2_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA45798.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_expt_500_bf_scaffold_1818_20
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16776..17234
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWD3_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:AKD04737.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1818_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17336..17734)
DNA (399bp) protein (133aa)
zinc-binding CMP/dCMP deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034C20C6
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:ACU63839.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_1818_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17859..19649
DNA (1791bp) protein (597aa)
signal peptide peptidase SppA, 67K type; K04773 protease IV [EC:3.4.21.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370CD1C
Signal peptide peptidase SppA, 67K type {ECO:0000313|EMBL:ACU63260.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_1818_23
unknown

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19682..19786
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1818_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19756..20043
DNA (288bp) protein (96aa)
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Biotin-requiring enzyme (Fragment) n=1 Tax=uncultured organism RepID=T1WCB2_9ZZZZ
Displaying 24 items

View Taxonomy