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SCNpilot_expt_500_bf_scaffold_1904

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1904_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..871
DNA (870bp) protein (290aa)
polysulfide reductase NrfD; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-]
Polysulphide reductase NrfD n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG42_CHIPD
Polysulphide reductase NrfD {ECO:0000313|EMBL:ACU58025.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_1904_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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980..1561
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG41_CHIPD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_500_bf_scaffold_1904_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1599..2273
DNA (675bp) protein (225aa)
Cytochrome c class I n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG40_CHIPD
cytochrome C class I
Cytochrome c class I {ECO:0000313|EMBL:ACU58023.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_1904_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2323..3531
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG39_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58022.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_1904_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3609..4685
DNA (1077bp) protein (359aa)
cytochrome C oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Cytochrome c oxidase subunit 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG38_CHIPD
SCNpilot_expt_500_bf_scaffold_1904_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4759..6510
DNA (1752bp) protein (584aa)
cytochrome C oxidase; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome-c oxidase {ECO:0000313|EMBL:ACU58020.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACU58020.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Cytochrome-c oxidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG37_CHIPD
SCNpilot_expt_500_bf_scaffold_1904_7
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7367..8398)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12700 RepID=S3XMH8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO12017.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
putative N-acetylglucosaminyltransferase
SCNpilot_expt_500_bf_scaffold_1904_8
unknown

Not on your lists

8684..8824
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1904_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9433..11310)
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Niabella soli DSM 19437 RepID=H1NTY2_9SPHI
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
SCNpilot_expt_500_bf_scaffold_1904_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11668..12714
DNA (1047bp) protein (349aa)
arginase/agmatinase/formiminoglutamase; K01480 agmatinase [EC:3.5.3.11]
Arginase/agmatinase/formiminoglutamase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPA9_CHIPD
Agmatinase {ECO:0000313|EMBL:KIC89955.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_500_bf_scaffold_1904_11
unknown

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12724..13377
DNA (654bp) protein (218aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1904_12
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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13541..14599
DNA (1059bp) protein (353aa)
PHA synthase PhaC n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZVL7_9BACT rbh
poly(R)-hydroxyalkanoic acid synthase subunit PhaC rbh
Tax=GWA2_Nitrospirae_42_11_curated
SCNpilot_expt_500_bf_scaffold_1904_13
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15213..16775
DNA (1563bp) protein (521aa)
gsiA; Glutathione import ATP-binding protein gsiA (EC:3.6.3.-)
Glutathione import ATP-binding protein gsiA n=3 Tax=Vibrio nigripulchritudo RepID=U4EVH4_9VIBR
Peptide ABC transporter ATPase {ECO:0000313|EMBL:AIW16183.1}; TaxID=1051646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
SCNpilot_expt_500_bf_scaffold_1904_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16889..17698
DNA (810bp) protein (270aa)
Methyltransferase type 11 n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KXI8_HALH1
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEE50359.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_expt_500_bf_scaffold_1904_15
unknown

Not on your lists

17807..18562
DNA (756bp) protein (252aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1904_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(18815..20608)
DNA (1794bp) protein (598aa)
30S ribosomal protein S1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMB8_CHIPD
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1
RNA binding S1 domain protein {ECO:0000313|EMBL:ACU64023.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_1904_17
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20768..21322
DNA (555bp) protein (185aa)
Cell wall assembly/cell proliferation coordinating protein, KNR4 n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TWN9_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KGF73841.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
Cell wall assembly/cell proliferation coordinating protein, KNR4
Displaying 17 items

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