ggKbase home page

SCNpilot_expt_500_bf_scaffold_1940

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1940_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(1..195)
DNA (195bp) protein (65aa)
Gliding motility-associated ABC transporter permease protein GldF id=4573506 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
gliding motility-associated ABC transporter permease GldF; K01992 ABC-2 type transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
SCNpilot_expt_500_bf_scaffold_1940_2
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(197..457)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VTG6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57067.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1940_3
unknown

Not on your lists

comp(709..1350)
DNA (642bp) protein (214aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1940_4
unknown

Not on your lists

comp(1363..1950)
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1940_5
unknown

Not on your lists

comp(2033..2647)
DNA (615bp) protein (205aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1940_6

Not on your lists

comp(2698..3417)
DNA (720bp) protein (240aa)
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] rbh
Pyridoxal phosphate biosynthesis protein PdxJ n=1 Tax=uncultured organism RepID=T1W871_9ZZZZ rbh
Pyridoxal phosphate biosynthesis protein PdxJ {ECO:0000313|EMBL:AGU10345.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
SCNpilot_expt_500_bf_scaffold_1940_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3438..4625)
DNA (1188bp) protein (396aa)
GTPase HflX n=1 Tax=Segetibacter koreensis RepID=UPI000361071D
GTP-binding protein HflX; K03665 GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_1940_8
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4737..6641)
DNA (1905bp) protein (635aa)
asparagine synthetase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VX33_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE98464.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
SCNpilot_expt_500_bf_scaffold_1940_9
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6628..8019)
DNA (1392bp) protein (464aa)
Polysaccharide biosynthesis protein n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LJX9_THEM4
Uncharacterized protein {ECO:0000313|EMBL:AHJ99346.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
polysaccharide biosynthesis protein
SCNpilot_expt_500_bf_scaffold_1940_10
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8023..8550)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Arcobacter butzleri JV22 RepID=E6L2W0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AHJ99347.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
transferase hexapeptide repeat containing protein
SCNpilot_expt_500_bf_scaffold_1940_11
unknown

Not on your lists

comp(8569..9162)
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1940_12
unknown

Not on your lists

comp(9175..9336)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1940_13
unknown

Not on your lists

comp(9412..9645)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1940_14
unknown

Not on your lists

10284..10700
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1940_15
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10809..11279)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G5N8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI89509.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1940_16
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11879..12460)
DNA (582bp) protein (194aa)
peptidase M48 Ste24p; K07387 putative metalloprotease [EC:3.4.24.-]
Zn-dependent protease with chaperone function n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KSV5_9FLAO rbh
Peptidase {ECO:0000313|EMBL:KFF11631.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
Displaying 16 items

View Taxonomy