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SCNpilot_expt_500_bf_scaffold_6545

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6545_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(7..1185)
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NMN7_9SPHI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_500_bf_scaffold_6545_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1253..1612
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCB8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01425.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_6545_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1646..4189
DNA (2544bp) protein (848aa)
Heat shock protein 70 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCB9_NIAKG rbh
Heat shock protein 70; K04043 molecular chaperone DnaK rbh
Heat shock protein 70 {ECO:0000313|EMBL:AEW01426.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_6545_4
unknown

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4199..5671
DNA (1473bp) protein (491aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6545_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5697..6002)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PS23_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60817.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_6545_6
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6002..6421)
DNA (420bp) protein (140aa)
Fe-S metabolism protein SufE n=1 Tax=Segetibacter koreensis RepID=UPI000372865D
Fe-S metabolism associated domain protein {ECO:0000313|EMBL:EEI90053.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
Fe-S metabolism associated SufE; K02426 cysteine desulfuration protein SufE
SCNpilot_expt_500_bf_scaffold_6545_7
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6542..7777
DNA (1236bp) protein (412aa)
Uncharacterized conserved protein UCP016719 n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BUM4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGD67987.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6545_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8512..9780
DNA (1269bp) protein (423aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGL9_NIAKG
SCNpilot_expt_500_bf_scaffold_6545_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9929..11005)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLF5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58499.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_6545_10
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11288..11488)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3X6_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:KGE15859.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6545_11
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11509..11817)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T688_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:BAP32853.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6545_12
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11814..12350)
DNA (537bp) protein (179aa)
DnaJ domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W6C2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64872.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
chaperone DnaJ domain-containing protein; K05516 curved DNA-binding protein
Displaying 12 items

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