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SCNpilot_expt_500_bf_scaffold_3252

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3252_1
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(349..966)
DNA (618bp) protein (206aa)
conjugal transfer protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6C4B0
Conjugal transfer protein {ECO:0000313|EMBL:KFF13743.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3252_2
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1036..2007)
DNA (972bp) protein (324aa)
Conjugative transposon TraJ protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YIB3_9SPHI
Conjugative transposon TraJ protein {ECO:0000313|EMBL:EHQ27526.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
conjugative transposon TraJ protein
SCNpilot_expt_500_bf_scaffold_3252_3
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2004..2630)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJS9_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:KGO80810.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3252_4

Not on your lists

comp(2659..3495)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HFE8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KKN13184.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3252_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3536..4186)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372E41D
Uncharacterized protein {ECO:0000313|EMBL:KIC89823.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3252_6
unknown

Not on your lists

comp(4200..4625)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3252_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4631..5311)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037148FF
Conjugal transfer protein TraI {ECO:0000313|EMBL:KIC89825.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3252_8
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5322..7841)
DNA (2520bp) protein (840aa)
Conjugation system ATPase, TraG family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDU7_9SPHI
Conjugation system ATPase, TraG family {ECO:0000313|EMBL:EHQ24287.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
type IV secretory pathway VirB4 components-like protein
SCNpilot_expt_500_bf_scaffold_3252_9
unknown

Not on your lists

comp(7943..8557)
DNA (615bp) protein (205aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3252_10
unknown

Not on your lists

comp(8599..8763)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3252_11
unknown

Not on your lists

comp(9091..9882)
DNA (792bp) protein (264aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3252_12
unknown

Not on your lists

comp(9893..10279)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3252_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10302..10607)
DNA (306bp) protein (102aa)
Carbamoyl phosphate synthetase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDV0_9SPHI
Carbamoyl phosphate synthetase {ECO:0000313|EMBL:EHQ24290.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3252_14
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10664..11089)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:CDT07106.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
SCNpilot_expt_500_bf_scaffold_3252_15
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11201..12043)
DNA (843bp) protein (281aa)
RteC protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNT6_SOLCM
RteC protein
RteC protein {ECO:0000313|EMBL:AFD05347.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_500_bf_scaffold_3252_16
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12093..13136)
DNA (1044bp) protein (348aa)
Uncharacterized protein {ECO:0000313|EMBL:CDT07113.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
SCNpilot_expt_500_bf_scaffold_3252_17
unknown

Not on your lists

comp(13163..13450)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3252_18
unknown

Not on your lists

14071..14520
DNA (450bp) protein (150aa)

This feature has no annotations

Displaying 18 items

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