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SCNpilot_expt_500_bf_scaffold_3863

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3863_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..2499
DNA (2499bp) protein (833aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
isoleucyl-tRNA synthase n=1 Tax=Segetibacter koreensis RepID=UPI000367F9DC
SCNpilot_expt_500_bf_scaffold_3863_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2502..3518
DNA (1017bp) protein (339aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PES3_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO41746.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
TraR/DksA family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3863_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3712..4956)
DNA (1245bp) protein (415aa)
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3]
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Homoserine dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK84_NIAKG
SCNpilot_expt_500_bf_scaffold_3863_4
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5001..6191)
DNA (1191bp) protein (397aa)
cystathionine gamma-lyase; K01760 cystathionine beta-lyase [EC:4.4.1.8]
Cystathionine gamma-lyase n=1 Tax=Formosa sp. AK20 RepID=M7N3R2_9FLAO
Cystathionine gamma-lyase {ECO:0000313|EMBL:EMQ96374.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
SCNpilot_expt_500_bf_scaffold_3863_5
unknown

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comp(6657..7181)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3863_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7181..8698)
DNA (1518bp) protein (506aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO41540.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
permease YjgP/YjgQ family protein id=4211782 bin=GWF2_Bacteroidetes_35_48 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
YjgP/YjgQ family permease rbh
Displaying 6 items

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