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SCNpilot_expt_500_bf_scaffold_4530

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4530_1
unknown

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comp(93..530)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4530_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(635..1774)
DNA (1140bp) protein (380aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFW7_CHIPD
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACU57950.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_4530_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1929..2921)
DNA (993bp) protein (331aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] rbh
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUX5_CHIPD rbh
SCNpilot_expt_500_bf_scaffold_4530_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3020..4093
DNA (1074bp) protein (358aa)
DNA replication and repair protein RecF n=1 Tax=Niabella soli DSM 19437 RepID=H1NMJ8_9SPHI
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF
SCNpilot_expt_500_bf_scaffold_4530_5
unknown

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comp(4924..5097)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4530_6
unknown

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5781..5978
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4530_7
unknown

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comp(6315..6737)
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4530_8
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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7204..8397
DNA (1194bp) protein (398aa)
phenylacetate-CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] rbh
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036C8D89 rbh
SCNpilot_expt_500_bf_scaffold_4530_9
unknown

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8822..10039
DNA (1218bp) protein (406aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4530_10
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10130..12922
DNA (2793bp) protein (931aa)
Por secretion system C-terminal sorting domain containing protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CDK0_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF73597.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4530_11
unknown

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12990..13220
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4530_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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13168..14607
DNA (1440bp) protein (480aa)
Outer membrane adhesin like protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJE5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKD54568.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
outer membrane adhesin-like protein
Displaying 12 items

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