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SCNpilot_expt_500_bf_scaffold_2149

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2149_1
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..856
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000382AAAA
Outer membrane efflux protein {ECO:0000313|EMBL:GAL85751.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
outer membrane efflux protein
SCNpilot_expt_500_bf_scaffold_2149_2
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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875..1933
DNA (1059bp) protein (353aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G4K0_9SPHI rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CDT02985.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
RND family efflux transporter MFP subunit
SCNpilot_expt_500_bf_scaffold_2149_3
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1954..2307
DNA (354bp) protein (118aa)
acriflavin resistance protein n=1 Tax=Empedobacter brevis RepID=UPI00036EBCBC
Acriflavin resistance protein {ECO:0000313|EMBL:KGE13010.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_expt_500_bf_scaffold_2149_4
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2304..5132
DNA (2829bp) protein (943aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G4J9_9SPHI
Acriflavin resistance protein {ECO:0000313|EMBL:GAL85753.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
multidrug resistance protein. AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_expt_500_bf_scaffold_2149_5
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5258..6412
DNA (1155bp) protein (385aa)
Signal transduction histidine kinase, LytS n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RV48_LEAB4
Signal transduction histidine kinase, lyts {ECO:0000313|EMBL:GAL85754.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
signal transduction histidine kinase, lyts
SCNpilot_expt_500_bf_scaffold_2149_6
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6448..7209
DNA (762bp) protein (254aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL85755.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Two component transcriptional regulator, LytTR family id=2995281 bin=GWF2_Bacteroidetes_35_48 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
LytTR family two component transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2149_7
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7246..8022)
DNA (777bp) protein (259aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
Tryptophan synthase alpha chain n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1HG72_9FLAO
tryptophan synthase, alpha subunit
SCNpilot_expt_500_bf_scaffold_2149_8
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8012..9202)
DNA (1191bp) protein (397aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000256|SAAS:SAAS00015859};; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20]
Tryptophan synthase beta chain n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1HLE5_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_2149_9
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9189..9812)
DNA (624bp) protein (208aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24]
N-(5''''-phosphoribosyl)anthranilate isomerase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B644B5
SCNpilot_expt_500_bf_scaffold_2149_10
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(9802..10596)
DNA (795bp) protein (265aa)
indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
Indole-3-glycerol phosphate synthase {ECO:0000313|EMBL:KIF31562.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Indole-3-glycerol phosphate synthase id=3317742 bin=GWF2_Bacteroidetes_40_14 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
SCNpilot_expt_500_bf_scaffold_2149_11
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(10593..11585)
DNA (993bp) protein (331aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18) rbh
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
Anthranilate phosphoribosyltransferase n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4ANV6_FLELS rbh
SCNpilot_expt_500_bf_scaffold_2149_12
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11588..11944)
DNA (357bp) protein (119aa)
Anthranilate synthase subunit II {ECO:0000313|EMBL:KGD68925.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
Glutamine amidotransferase of anthranilate synthase id=3317740 bin=GWF2_Bacteroidetes_40_14 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
Displaying 12 items

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