name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_2283_1
unknown
|
Not on your lists |
comp(2..478)
----------------- DNA (477bp) protein (159aa) |
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_2283_2
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(624..1136)
----------------- DNA (513bp) protein (171aa) |
Response regulator receiver protein {ECO:0000313|EMBL:GAL86714.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Response regulator of Zn/Pb responsive two-component regulatory system id=4816212 bin=GWA2_Bacteroidetes_42_15 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
response regulator receiver protein
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SCNpilot_expt_500_bf_scaffold_2283_3
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(1229..2551)
----------------- DNA (1323bp) protein (441aa) |
methylmalonyl-CoA mutase small subunit; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Putative methylmalonyl-CoA mutase small subunit n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UKK9_9FLAO
Putative methylmalonyl-CoA mutase small subunit {ECO:0000313|EMBL:EDP70291.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
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SCNpilot_expt_500_bf_scaffold_2283_4
Nonlabens dokdonensis, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2566..2967)
----------------- DNA (402bp) protein (134aa) |
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029AD727
protein containing DUF393
Protein containing DUF393 {ECO:0000313|EMBL:AGC78362.1}; TaxID=592029 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6); (Donghaeana dokdonensis).;"
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SCNpilot_expt_500_bf_scaffold_2283_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(2987..4030)
----------------- DNA (1044bp) protein (348aa) |
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-galactose-4-epimerase n=1 Tax=Niabella aurantiaca RepID=UPI000381CF7C
UDP-glucose 4-epimerase {ECO:0000313|EMBL:GAO45094.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
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SCNpilot_expt_500_bf_scaffold_2283_6
unknown
|
Not on your lists |
4247..4405
----------------- DNA (159bp) protein (53aa) |
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_2283_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(4457..5605)
----------------- DNA (1149bp) protein (383aa) |
lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-]
Lytic transglycosylase catalytic n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQE3_CHIPD
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACU58832.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
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SCNpilot_expt_500_bf_scaffold_2283_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(5840..6064)
----------------- DNA (225bp) protein (75aa) |
Sec-independent translocation protein mttA/Hcf106 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJT2_NIAKG
sec-independent translocation protein mttA/Hcf106; K03116 sec-independent protein translocase protein TatA
Sec-independent translocation protein mttA/Hcf106 {ECO:0000313|EMBL:AEW01830.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
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SCNpilot_expt_500_bf_scaffold_2283_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(6167..7984)
----------------- DNA (1818bp) protein (606aa) |
Phage shock protein C, PspC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF31_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO42376.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
phage shock protein C, PspC
|
|
SCNpilot_expt_500_bf_scaffold_2283_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(7990..8322)
----------------- DNA (333bp) protein (111aa) |
Transcriptional regulator, PadR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NTI3_9SPHI
PadR family transcriptional regulator {ECO:0000313|EMBL:AHF16137.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PadR family transcriptional regulator; K10947 PadR family transcriptional regulator, regulatory protein PadR
|
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SCNpilot_expt_500_bf_scaffold_2283_11
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(8365..8709)
----------------- DNA (345bp) protein (115aa) |
Membrane protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NV69_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AIM36590.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
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SCNpilot_expt_500_bf_scaffold_2283_12
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
8878..9267
----------------- DNA (390bp) protein (130aa) |
Thioesterase superfamily protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGF3_FLUTR
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:AEA45819.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
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SCNpilot_expt_500_bf_scaffold_2283_13
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(9411..11606)
----------------- DNA (2196bp) protein (732aa) |
iron dicitrate transporter n=1 Tax=Spirosoma spitsbergense RepID=UPI00037A3405
rbh
Iron dicitrate transporter {ECO:0000313|EMBL:AKD58764.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
rbh
|
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SCNpilot_expt_500_bf_scaffold_2283_14
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(11606..12874)
----------------- DNA (1269bp) protein (423aa) |
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000368EA4E
rbh
Deoxyribonuclease HsdR {ECO:0000313|EMBL:KJJ37563.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
Vitamin K-dependent gamma-carboxylase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_2283_15
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12999..14198)
----------------- DNA (1200bp) protein (400aa) |
Peptidase M75, Imelysin n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QNH4_SPILD
Peptidase M75,Imelysin {ECO:0000313|EMBL:GAL85494.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
peptidase M75, Imelysin
|
|
SCNpilot_expt_500_bf_scaffold_2283_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(14295..14843)
----------------- DNA (549bp) protein (183aa) |
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00036CC693
Uncharacterized protein {ECO:0000313|EMBL:AKD57572.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2283_17
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(14803..15351)
----------------- DNA (549bp) protein (183aa) |
Uncharacterized protein {ECO:0000313|EMBL:ETN97016.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
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SCNpilot_expt_500_bf_scaffold_2283_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(15496..16812)
----------------- DNA (1317bp) protein (439aa) |
dehydrogenase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Dihydrolipoyllysine-residue succinyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI59_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94488.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
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SCNpilot_expt_500_bf_scaffold_2283_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(17013..17879)
----------------- DNA (867bp) protein (289aa) |
MscS Mechanosensitive ion channel n=1 Tax=Niabella soli DSM 19437 RepID=H1NKW8_9SPHI
rbh
Mechanosensitive ion channel protein {ECO:0000313|EMBL:AHF14385.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
small-conductance mechanosensitive channel; K03442 small conductance mechanosensitive channel
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SCNpilot_expt_500_bf_scaffold_2283_20
unknown
|
Not on your lists |
comp(18163..18921)
----------------- DNA (759bp) protein (253aa) |
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_2283_21
unknown
|
Not on your lists |
comp(18943..20028)
----------------- DNA (1086bp) protein (362aa) |
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_2283_22
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria
|
Not on your lists |
20518..21333
----------------- DNA (816bp) protein (272aa) |
Outer membrane assembly lipoprotein YfiO n=1 Tax=Niabella soli DSM 19437 RepID=H1NSV9_9SPHI
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
Tax=BJP_IG2102_Bacteroidetes_40_9
|
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SCNpilot_expt_500_bf_scaffold_2283_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
21320..21640
----------------- DNA (321bp) protein (107aa) |
DNA-directed RNA polymerase, omega subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC9_CHIPD
DNA-directed RNA polymerase subunit omega
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:ACU64368.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
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SCNpilot_expt_500_bf_scaffold_2283_24
unknown
|
Not on your lists |
comp(21715..22056)
----------------- DNA (342bp) protein (114aa) |
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_2283_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(22043..22618)
----------------- DNA (576bp) protein (192aa) |
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUW3_CHIPD
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU62872.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
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SCNpilot_expt_500_bf_scaffold_2283_26
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(22700..23356)
----------------- DNA (657bp) protein (219aa) |
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BEN9_ZUNPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF50768.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
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SCNpilot_expt_500_bf_scaffold_2283_27
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(23391..23534)
----------------- DNA (144bp) protein (48aa) |
Conserved repeat domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5P7_PEDSD
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:ADY54221.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
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