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SCNpilot_expt_500_bf_scaffold_2463

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2463_1
unknown

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2463_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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303..749
DNA (447bp) protein (149aa)
Glyoxalase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8G0_9FLAO
Glyoxalase family protein {ECO:0000313|EMBL:EFK33688.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
PhnB protein; DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein; K04750 PhnB protein
SCNpilot_expt_500_bf_scaffold_2463_3
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

803..1207
DNA (405bp) protein (135aa)
Phage envelope protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C4T9_9FLAO
Phage envelope protein {ECO:0000313|EMBL:KFF21519.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
Phage envelope protein-like protein
SCNpilot_expt_500_bf_scaffold_2463_4
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1225..2253)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036C6B65 rbh
Transcriptional regulator {ECO:0000313|EMBL:KGO87572.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_2463_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3091..5328
DNA (2238bp) protein (746aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2D1_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK00166.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2463_6
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5396..6820
DNA (1425bp) protein (475aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCUG 10230.;"
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3]
protein rtcB n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000345777B
SCNpilot_expt_500_bf_scaffold_2463_7
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6986..7936)
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EGE2_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJJ39178.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2463_8
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8332..10599)
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NWH0_9SPHI rbh
Putative dipeptidyl anminopeptidase {ECO:0000313|EMBL:KGE16175.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
dipeptidyl anminopeptidase rbh
SCNpilot_expt_500_bf_scaffold_2463_9
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10846..11391
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029A7D89
hypothetical protein
Tax=CG_Ignavi_02
SCNpilot_expt_500_bf_scaffold_2463_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11481..11732)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C0F0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC89749.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2463_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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11936..12547
DNA (612bp) protein (204aa)
NAD(P)H dehydrogenase (Quinone) n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRL3_DYAFD rbh
NAD(P)H dehydrogenase (quinone); K03923 modulator of drug activity B rbh
NAD(P)H dehydrogenase (Quinone) {ECO:0000313|EMBL:ACT92716.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_500_bf_scaffold_2463_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12655..12936)
DNA (282bp) protein (94aa)
Appr-1-p processing domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNK9_CHIPD
Appr-1-p processing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:ACU64109.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_2463_13
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13306..13878
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000365BCD8
Uncharacterized protein {ECO:0000313|EMBL:KGO93599.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
putative Crp/Fnr family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2463_14
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13875..14177)
DNA (303bp) protein (101aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V4F2_9BACT
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AJW63548.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
Antibiotic biosynthesis monooxygenase
SCNpilot_expt_500_bf_scaffold_2463_15
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14275..15033
DNA (759bp) protein (253aa)
HEAT domain containing protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ63_PEDHD rbh
HEAT domain-containing protein rbh
HEAT domain containing protein {ECO:0000313|EMBL:ACU02545.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_500_bf_scaffold_2463_16
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15119..15643
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037F767E
Uncharacterized protein {ECO:0000313|EMBL:KFF12822.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
TetR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2463_17
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15700..16707
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FW38_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF15842.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein; K08994 putative membrane protein rbh
SCNpilot_expt_500_bf_scaffold_2463_18
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16808..17677
DNA (870bp) protein (290aa)
Beta-lactamase domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1E9_SPHS2
Contig6, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78819.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
beta-lactamase
SCNpilot_expt_500_bf_scaffold_2463_19
unknown

Not on your lists

17677..17793
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2463_20
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17800..18450
DNA (651bp) protein (217aa)
Semialdehyde dehydrogenase family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN12_9FLAO
Semialdehyde dehydrogenase family protein {ECO:0000313|EMBL:EJL74984.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2463_21
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18479..19033
DNA (555bp) protein (185aa)
methyladenine glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W723_9FLAO rbh
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:KFC20162.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_expt_500_bf_scaffold_2463_22
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19098..20036
DNA (939bp) protein (313aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I4A214_ORNRL rbh
alpha/beta hydrolase rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AFL97998.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source="Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG; 23171 / LMG 9086).;"
SCNpilot_expt_500_bf_scaffold_2463_23
unknown

Not on your lists

20105..20605
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2463_24
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20730..22445
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036368A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG57795.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
SCNpilot_expt_500_bf_scaffold_2463_25
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22539..23936)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SEG1_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO96697.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
hypothetical protein; K06889 rbh
SCNpilot_expt_500_bf_scaffold_2463_26
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24164..24796
DNA (633bp) protein (211aa)
alkyl hydroperoxide reductase; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Peroxiredoxin n=1 Tax=Joostella marina DSM 19592 RepID=I3CAM9_9FLAO rbh
Peroxiredoxin {ECO:0000313|EMBL:EIJ40672.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
SCNpilot_expt_500_bf_scaffold_2463_27
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24881..25195
DNA (315bp) protein (105aa)
Thioredoxin domain-containing protein n=4 Tax=Riemerella anatipestifer RepID=E4TB45_RIEAD
hypothetical protein
Thioredoxin domain-containing protein {ECO:0000313|EMBL:AFD55303.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
SCNpilot_expt_500_bf_scaffold_2463_28
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25176..25424
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI00035DE7FD
Uncharacterized protein {ECO:0000313|EMBL:EOR29969.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2463_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25552..26145
DNA (594bp) protein (198aa)
Scaffold protein Nfu/NifU n=1 Tax=Niabella soli DSM 19437 RepID=H1NRT1_9SPHI
Putative iron-sulfur cluster scaffold protein {ECO:0000313|EMBL:GAO42240.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Scaffold protein Nfu/NifU
SCNpilot_expt_500_bf_scaffold_2463_30
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26222..26863)
DNA (642bp) protein (214aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Peptide deformylase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IV14_9PORP
Displaying items 1-30 of 34 in total

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