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SCNpilot_expt_500_bf_scaffold_2689

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2689_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..221)
DNA (219bp) protein (73aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMX4_CHIPD
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ACU60408.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_2689_2
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(233..751)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXA0_SOLCM
hypothetical protein, DUF255
Uncharacterized protein {ECO:0000313|EMBL:AFD08429.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_500_bf_scaffold_2689_3
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(775..1728)
DNA (954bp) protein (318aa)
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:EOZ96655.1}; EC=3.2.1.- {ECO:0000313|EMBL:EOZ96655.1};; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
Membrane-bound lytic murein transglycosylase D n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DHN8_9BACT
Soluble lytic murein transglycosylase-like protein
SCNpilot_expt_500_bf_scaffold_2689_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1921..3045
DNA (1125bp) protein (375aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase small chain n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NVN9_9SPHI rbh
SCNpilot_expt_500_bf_scaffold_2689_5
R_OD1_Nomurabacteria_40_20, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3073..4023
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCD3_CHIPD
NAD-dependent epimerase/dehydratase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_40_20_curated
SCNpilot_expt_500_bf_scaffold_2689_6
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4478..4834
DNA (357bp) protein (119aa)
Bleomycin resistance protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z3X9_FLABF
Bleomycin resistance protein
Bleomycin resistance protein {ECO:0000313|EMBL:CCB68310.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
SCNpilot_expt_500_bf_scaffold_2689_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4890..5276)
DNA (387bp) protein (129aa)
3-oxoacid CoA-transferase subunit B; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
3-oxoacid CoA-transferase, B subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC4_CHIPD
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KIC89386.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_500_bf_scaffold_2689_8
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5260..5547)
DNA (288bp) protein (96aa)
3-oxoacid CoA-transferase; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
Butyryl-CoA:acetate CoA transferase {ECO:0000313|EMBL:ABL98729.1}; EC=2.8.3.8 {ECO:0000313|EMBL:ABL98729.1};; TaxID=326297 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella amazonensis (strain ATCC BAA-1098 / SB2B).;"
Butyryl-CoA:acetate CoA transferase n=1 Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1S2X3_SHEAM
SCNpilot_expt_500_bf_scaffold_2689_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5617..6552)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003798ED6
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_500_bf_scaffold_2689_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6545..7243)
DNA (699bp) protein (233aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSY8_CHIPD
SCNpilot_expt_500_bf_scaffold_2689_11
unknown

Not on your lists

comp(7326..7766)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2689_12
unknown

Not on your lists

comp(8141..8548)
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2689_13
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8638..9198
DNA (561bp) protein (187aa)
Peroxiredoxin (EC:1.11.1.12 1.11.1.15); K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CAC6_9FLAO
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
SCNpilot_expt_500_bf_scaffold_2689_14
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

9210..10292
DNA (1083bp) protein (361aa)
YVTN family beta-propeller repeat protein id=4368799 bin=GWF2_Bacteroidetes_35_48 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
surface layer protein
Tax=CG_Bacteroid_01
SCNpilot_expt_500_bf_scaffold_2689_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10285..12072
DNA (1788bp) protein (596aa)
Surface antigen (D15) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMQ1_NIAKG
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AEW03072.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_2689_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12128..12814
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000376FB7C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58636.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_2689_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12847..13332
DNA (486bp) protein (162aa)
Uncharacterized conserved protein UCP033563 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNV9_NIAKG
hypothetical protein
Uncharacterized conserved protein UCP033563 {ECO:0000313|EMBL:AEW02044.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_2689_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13355..13897
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMK7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC93756.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2689_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13922..14341
DNA (420bp) protein (140aa)
DoxX family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEG4_NIAKG
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AEV98374.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_2689_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14381..15064
DNA (684bp) protein (228aa)
DoxX family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUY4_CHIPD
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ACU62893.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_2689_21
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(15143..15490)
DNA (348bp) protein (116aa)
Secreted protein id=4345502 bin=GWF2_Bacteroidetes_43_63 species=Polynucleobacter necessarius genus=Polynucleobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
Tax=GWF2_Bacteroidetes_43_63_curated
SCNpilot_expt_500_bf_scaffold_2689_22
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15549..16082)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CGK8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:BAP30192.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
SCNpilot_expt_500_bf_scaffold_2689_23
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16315..16866)
DNA (552bp) protein (184aa)
Secreted protease metal-dependent protease id=3762954 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_expt_500_bf_scaffold_2689_24
unknown

Not on your lists

comp(16823..17527)
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2689_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17879..18958
DNA (1080bp) protein (360aa)
hypothetical protein; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQI3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:AEW03230.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_2689_26
unknown

Not on your lists

19070..19768
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2689_27
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20075..20467)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2D4E8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EOZ91935.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
XRE family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2689_28
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20918..22606
DNA (1689bp) protein (563aa)
Rhs family-like protein (EC:3.2.1.-); K01238 [EC:3.2.1.-]
CHU large protein possible Rhs family-related protein and SAP-related protein {ECO:0000313|EMBL:ABG58796.1}; EC=3.2.1.- {ECO:0000313|EMBL:ABG58796.1};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
CHU large protein; possible Rhs family-related protein and SAP-related protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11UX0_CYTH3
SCNpilot_expt_500_bf_scaffold_2689_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22833..23960
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035F7D5D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95321.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_500_bf_scaffold_2689_30
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24302..25066
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G3F6_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EEI90161.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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