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SCNpilot_expt_500_bf_scaffold_416

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_416_1
unknown

Not on your lists

1..81
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_416_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179..901
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7M5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36734.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Crp/FNR family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
SCNpilot_expt_500_bf_scaffold_416_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(982..1854)
DNA (873bp) protein (291aa)
Alpha/beta hydrolase, putative arylformamidase n=2 Tax=Oligotropha carboxidovorans RepID=B6JE69_OLICO rbh
alpha/beta hydrolase, putative arylformamidase rbh
Alpha/beta hydrolase, putative arylformamidase {ECO:0000313|EMBL:AEI05943.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_bf_scaffold_416_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1951..2766
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3A0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52430.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_416_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2921..3133
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V399_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEG07079.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_expt_500_bf_scaffold_416_6
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3346..3546)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7S0_9BRAD
cspA; cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:EJZ29284.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_expt_500_bf_scaffold_416_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3840..4088)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5R2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36791.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_416_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4453..5505)
DNA (1053bp) protein (351aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002F226AC
TIGR01620 family protein {ECO:0000313|EMBL:EKS36790.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K08990 putative membrane protein
SCNpilot_expt_500_bf_scaffold_416_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5502..6965)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7R7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36789.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K06918 rbh
SCNpilot_expt_500_bf_scaffold_416_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7146..7847
DNA (702bp) protein (234aa)
Hemolysin III family channel protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEM1_9BRAD rbh
Hemolysin III family channel protein {ECO:0000313|EMBL:EKS36788.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hemolysin III; K11068 hemolysin III rbh
SCNpilot_expt_500_bf_scaffold_416_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8223..10028
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKY1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41424.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
glycosyl hydrolase family protein rbh
SCNpilot_expt_500_bf_scaffold_416_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10170..11507)
DNA (1338bp) protein (446aa)
Cof-like hydrolase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PPI3_9BRAD rbh
Cof-like hydrolase {ECO:0000313|EMBL:EKS41425.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative cof hydrolase rbh
SCNpilot_expt_500_bf_scaffold_416_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11504..12250)
DNA (747bp) protein (249aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31); K01057 6-phosphogluconolactonase [EC:3.1.1.31]
6-phosphogluconolactonase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFL5_9BRAD rbh
6-phosphogluconolactonase {ECO:0000313|EMBL:EKS41427.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_500_bf_scaffold_416_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12247..13767)
DNA (1521bp) protein (507aa)
zwf; glucose-6-phosphate 1-dehydrogenase Zwf (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] rbh
Glucose-6-phosphate 1-dehydrogenase Zwf {ECO:0000313|EMBL:AEI07584.1}; EC=1.1.1.49 {ECO:0000313|EMBL:AEI07584.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Glucose-6-phosphate 1-dehydrogenase n=2 Tax=Oligotropha carboxidovorans RepID=B6JBY7_OLICO rbh
SCNpilot_expt_500_bf_scaffold_416_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13768..14802)
DNA (1035bp) protein (345aa)
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] rbh
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:AEI07583.1}; EC=1.1.1.44 {ECO:0000313|EMBL:AEI07583.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
6-phosphogluconate dehydrogenase n=2 Tax=Oligotropha carboxidovorans RepID=B6JBY8_OLICO rbh
SCNpilot_expt_500_bf_scaffold_416_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14812..17655)
DNA (2844bp) protein (948aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
tal; transaldolase Tal (EC:2.2.1.2); K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] rbh
Transaldolase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V387_9BRAD rbh
SCNpilot_expt_500_bf_scaffold_416_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18114..18350
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXW5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31048.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_416_18
Burkholderia sp. A9, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18425..19285
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000365FAC1 rbh
Hydrolase {ECO:0000313|EMBL:KHK59521.1}; TaxID=1365108 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. A9.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_416_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19420..19917)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PA92_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35243.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
YbaK/prolyl-tRNA synthetase associated domain-containing protein
SCNpilot_expt_500_bf_scaffold_416_20
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19979..20422
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V383_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52413.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_416_21
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20823..20948
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=5 Tax=Bradyrhizobiaceae RepID=B6JBZ9_OLICO
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_expt_500_bf_scaffold_416_22
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21081..21731
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PA74_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS35233.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_416_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21728..22816)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07M27_RHOP5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ07007.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_expt_500_bf_scaffold_416_24
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22986..23579)
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BND3_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07571.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_bf_scaffold_416_25
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23793..24095
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V373_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52403.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
deoxycytidine triphosphate deaminase; K09948 hypothetical protein
SCNpilot_expt_500_bf_scaffold_416_26
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24393..24779
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034C8B1B
hypothetical protein
UPF0335 protein OCAR_5086/OCA5_c28780 {ECO:0000255|HAMAP-Rule:MF_00797}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_bf_scaffold_416_27
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25097..25801)
DNA (705bp) protein (235aa)
ArsR family transcriptional regulator n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000372EFC9 rbh
ArsR family transcriptional regulator rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCNpilot_expt_500_bf_scaffold_416_28
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25875..26606
DNA (732bp) protein (244aa)
beta-lactamase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037ACEE2 rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:EDZ99885.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
metallo-beta-lactamase superfamily protein rbh
SCNpilot_expt_500_bf_scaffold_416_29
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26619..27896
DNA (1278bp) protein (426aa)
major facilitator transporter id=12551691 bin=BDI species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
MFS transporter {ECO:0000313|EMBL:AIF48502.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
major facilitator superfamily protein rbh
SCNpilot_expt_500_bf_scaffold_416_30
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27896..28999
DNA (1104bp) protein (368aa)
YeeE/YedE n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYH9_9PROT rbh
Membrane protein {ECO:0000313|EMBL:KJS34493.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
transporter component; K07112 rbh
Displaying items 1-30 of 32 in total

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