name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_1244_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..1378
|
PAS domain S-box protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGD4_AFIFE
rbh
PAS domain S-box protein {ECO:0000313|EMBL:EKS28066.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; K03776 aerotaxis receptor
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1244_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1445..2749)
|
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Citrate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9M4_9BRAD
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1244_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2895..4316)
|
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Glutamate--tRNA ligase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPA8_AFIFE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1244_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4528..6204
|
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Glutamine--tRNA ligase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHZ0_AFIFE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1244_5
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6262..6858
|
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y6B5_9BRAD
rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ99499.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
conjugative transposon protein
|
|
SCNpilot_expt_500_bf_scaffold_1244_6
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6855..7163)
|
Uncharacterized protein {ECO:0000313|EMBL:KGT77972.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
|
|
SCNpilot_expt_500_bf_scaffold_1244_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7342..8859
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9F8_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38161.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K02238 competence protein ComEC
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1244_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8877..9584
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000308E1DA
Uncharacterized protein {ECO:0000313|EMBL:EKS38161.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K02238 competence protein ComEC
|
|
SCNpilot_expt_500_bf_scaffold_1244_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9824..10525)
|
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
LexA repressor n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGE0_AFIFE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1244_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10756..11988)
|
moeA3; molybdopterin biosynthesis protein MoeA; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
rbh
Molybdenum cofactor synthesis domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9L6_9BRAD
rbh
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:EFI50160.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
|
|
SCNpilot_expt_500_bf_scaffold_1244_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11996..12481)
|
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9L5_9BRAD
moaC; GTP cyclohydrolase subunit MoaC; K03637 molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
|
|
SCNpilot_expt_500_bf_scaffold_1244_12
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12492..13319)
|
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
Indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
Indole-3-glycerol phosphate synthase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D969_BRAJP
|
|
SCNpilot_expt_500_bf_scaffold_1244_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13334..14347)
|
trpD; anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18]
rbh
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Anthranilate phosphoribosyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=TRPD_RHOP5
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1244_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14352..16259)
|
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1244_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16462..17229
|
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Triosephosphate isomerase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PFK7_9BRAD
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1244_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17481..17858
|
Preprotein translocase subunit SecG n=2 Tax=Bradyrhizobiaceae RepID=F7QMJ3_9BRAD
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EKS40322.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
|
|
SCNpilot_expt_500_bf_scaffold_1244_17
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18023..19654
|
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
CTP synthase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SHN3_9BRAD
rbh
CTP synthetase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1244_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19737..20552
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JFY9_OLICO
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI06449.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_500_bf_scaffold_1244_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20714..21046
|
NIPSNAP family containing protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9K7_9BRAD
NIPSNAP family containing protein {ECO:0000313|EMBL:EFI50151.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
nipsnap family containing protein
|
|
SCNpilot_expt_500_bf_scaffold_1244_20
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21111..21806
|
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMJ8_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP07563.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|