name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_1387_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..888)
|
Protein CbbX n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLJ6_AFIFE
rbh
Protein CbbX {ECO:0000313|EMBL:EKS29996.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cbbX; rubisco expressions protein CbbX
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(891..1316)
|
cbbS; ribulose bisphosphate carboxylase small chain CbbS (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
Ribulose bisphosphate carboxylase small chain n=3 Tax=cellular organisms RepID=K8NI10_AFIFE
Ribulose bisphosphate carboxylase small chain {ECO:0000313|EMBL:EKS29997.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
|
|
SCNpilot_expt_500_bf_scaffold_1387_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1333..2793)
|
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cbbL; ribulose bisphosphate carboxylase large chain CbbL (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
rbh
Ribulose bisphosphate carboxylase large chain n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUU0_AFIFE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2849..3934)
|
cbbA; fructose-1,6-bisphosphate aldolase CbbA (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
rbh
Fructose-bisphosphate aldolase 2 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNK3_AFIFE
rbh
Fructose-bisphosphate aldolase 2 {ECO:0000313|EMBL:EKS29999.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
|
|
SCNpilot_expt_500_bf_scaffold_1387_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3944..5152)
|
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
rbh
Phosphoglycerate kinase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR85_AFIFE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5149..6156)
|
gap; glyceraldehyde-3-phosphate dehydrogenase Gap (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
rbh
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Glyceraldehyde-3-phosphate dehydrogenase Gap n=2 Tax=Oligotropha carboxidovorans RepID=F8BQM5_OLICM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6159..8222)
|
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Transketolase n=2 Tax=Oligotropha carboxidovorans RepID=F8BQM4_OLICM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8219..9091)
|
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Phosphoribulokinase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUU3_AFIFE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9106..10140)
|
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cbbF; fructose-1,6-bisphosphatase CbbF (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11]
rbh
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNK7_AFIFE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10296..11312
|
Rubisco-operon transcriptional regulator CbbR n=2 Tax=Oligotropha carboxidovorans RepID=F8BQM1_OLICM
rbh
cbbR; rubisco-operon transcriptional regulator CbbR
rbh
Rubisco-operon transcriptional regulator CbbR {ECO:0000313|EMBL:AEI08114.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_500_bf_scaffold_1387_11
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11628..12446)
|
Putative beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase/Tartronate semialdehyde reductase-related {ECO:0000313|EMBL:CCF22302.1}; EC=1.1.1.60 {ECO:0000313|EMBL:CCF22302.1};; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;"
garR; 2-hydroxy-3-oxopropionate reductase; K08318 putative dehydrogenase [EC:1.1.-.-]
Putative beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase/Tartronate semialdehyde reductase-related n=1 Tax=Rhizobium sp. RepID=L0NNQ3_RHISP
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12567..13562)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKX1_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30972.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative zinc-binding alcohol dehydrogenase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13573..14337)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPA9_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30971.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
|
|
SCNpilot_expt_500_bf_scaffold_1387_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14341..15654)
|
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hisD2; histidinol dehydrogenase (EC:1.1.1.23); K15509 sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
rbh
Histidinol dehydrogenase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU39_AFIFE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15715..16773)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR99_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30969.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; K02051 NitT/TauT family transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16807..17604)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXP1_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30968.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17615..18400)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKW6_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30967.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
binding-protein-dependent transporter inner membrane component family protein 19; K02050 NitT/TauT family transport system permease protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18402..19178)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPA5_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30966.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
binding-protein-dependent transporter inner membrane component family protein 20; K02050 NitT/TauT family transport system permease protein
|
|
SCNpilot_expt_500_bf_scaffold_1387_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19340..20347
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU34_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30965.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
periplasmic-binding protein/LacI transcriptional regulator; K02529 LacI family transcriptional regulator
|
|
SCNpilot_expt_500_bf_scaffold_1387_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20585..21499)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P759_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38432.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21667..22062
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJN4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41741.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1387_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22102..23034)
|
Dihydrodipicolinate synthetase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAA2_9BRAD
rbh
L-2-keto-3-deoxyarabonate dehydratase {ECO:0000313|EMBL:CEG07658.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
SCNpilot_expt_500_bf_scaffold_1387_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23208..23645
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH99_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27809.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1387_24
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23726..24109)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNN2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27808.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1387_25
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24109..24507)
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030C6568
Uncharacterized protein {ECO:0000313|EMBL:EGP06709.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1387_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24647..25381
|
ArsR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0003196935
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS38448.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transcriptional regulator
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_27
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25427..26281
|
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PKJ8_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP06712.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1387_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26372..26668)
|
Twin-arginine translocation (Tat) n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAA7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07655.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
twin-arginine translocation (Tat)
|
|
SCNpilot_expt_500_bf_scaffold_1387_29
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26858..27127
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D5D5F2
Uncharacterized protein {ECO:0000313|EMBL:EKS38454.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1387_30
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27203..27478)
|
Flagellar biosynthetic protein FlhB n=2 Tax=Oligotropha carboxidovorans RepID=B6JF28_OLICO
flagellar biosynthetic protein FlhB; K04061 flagellar biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06993.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|