name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_1732_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..204
|
RNA polymerase sigma factor RpoD n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YNC5_9BRAD
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
|
|
SCNpilot_expt_500_bf_scaffold_1732_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(343..684)
|
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V302_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07189.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1732_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1151..1957
|
Lytic murein transglycosylase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AN2_RHOPB
rbh
lytic murein transglycosylase
rbh
Lytic murein transglycosylase {ECO:0000313|EMBL:ABD86554.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_expt_500_bf_scaffold_1732_4
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2157..2291)
|
Uncharacterized protein {ECO:0000313|EMBL:KGD53187.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;"
|
|
SCNpilot_expt_500_bf_scaffold_1732_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2715..3908
|
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2Z9_9BRAD
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS36957.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
diguanylate cyclase
|
|
SCNpilot_expt_500_bf_scaffold_1732_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4052..4615
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPX8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31186.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1732_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4653..4940)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLI7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31187.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1732_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5310..5717)
|
msrB2; peptide methionine sulfoxide reductase MsrB (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:AEI07512.1}; EC=1.8.4.12 {ECO:0000313|EMBL:AEI07512.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Peptide methionine sulfoxide reductase MsrB n=2 Tax=Oligotropha carboxidovorans RepID=B6JC64_OLICO
|
|
SCNpilot_expt_500_bf_scaffold_1732_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5736..6461)
|
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
msrA1; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
rbh
Peptide methionine sulfoxide reductase MsrA n=2 Tax=Bradyrhizobiaceae RepID=F7QFQ8_9BRAD
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1732_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6789..6980
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000361C898
Uncharacterized protein {ECO:0000313|EMBL:EGP08638.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
|
|
SCNpilot_expt_500_bf_scaffold_1732_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7090..7473)
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NWD0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32779.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1732_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7547..8764)
|
Exodeoxyribonuclease V n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2Z4_9BRAD
rbh
Conjugal transfer relaxase TraA {ECO:0000313|EMBL:CEG07197.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
SCNpilot_expt_500_bf_scaffold_1732_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8823..9227
|
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2Z3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07198.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1732_14
unknown
|
Not on your lists |
9262..9420
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_1732_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9495..10808)
|
ATPase AAA n=1 Tax=Afipia birgiae RepID=UPI00031468E7
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41097.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Fis family two component transcriptional regulator sigma-54 specific
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1732_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10865..11218)
|
flagellar motor switch protein (EC:3.-.-.-); K02417 flagellar motor switch protein FliN/FliY
Flagellar motor switch protein FliN n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2V8_9BRAD
Flagellar motor switch protein FliN {ECO:0000313|EMBL:CEG07233.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
SCNpilot_expt_500_bf_scaffold_1732_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11222..11863)
|
Flagellar assembly protein FliH n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJC4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32788.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
fliH; flagellar assembly protein H; K02411 flagellar assembly protein FliH
|
|
SCNpilot_expt_500_bf_scaffold_1732_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11863..12951)
|
Flagellar motor switch protein FliG n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJC5_9BRAD
rbh
Flagellar motor switch protein FliG {ECO:0000313|EMBL:EGP08650.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
fliG; flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1732_19
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12958..14532)
|
Flagellar M-ring protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJC6_9BRAD
rbh
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
fliF; flagellar MS-ring protein; K02409 flagellar M-ring protein FliF
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1732_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14826..15101)
|
Uncharacterized protein n=25 Tax=Bradyrhizobiaceae RepID=A4Z085_BRASO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE41068.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_expt_500_bf_scaffold_1732_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15277..15984)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYQ2_AFIFE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31303.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1732_22
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15995..17518)
|
Flagellar hook-length control protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJC9_9BRAD
rbh
Flagellar hook-length control protein {ECO:0000313|EMBL:EGP08654.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
flagellar hook-length control protein
|
|
SCNpilot_expt_500_bf_scaffold_1732_23
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17776..18966
|
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJD1_9BRAD
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1732_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18990..19628
|
phosphatidylethanolamine N-methyltransferase; K00551 phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17]
Phosphatidyl-N-methylethanolamine N-methyltransferase {ECO:0000313|EMBL:ABD86558.1}; EC=2.1.1.71 {ECO:0000313|EMBL:ABD86558.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Phosphatidyl-N-methylethanolamine N-methyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AM8_RHOPB
|
|
SCNpilot_expt_500_bf_scaffold_1732_25
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21129..21413
|
Uncharacterized protein n=3 Tax=Bradyrhizobium RepID=G7D292_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:BAR53612.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1732_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21410..22114
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9A7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36185.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
|
|
SCNpilot_expt_500_bf_scaffold_1732_27
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22131..23723
|
MobA-related protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QPE3_9BRAD
MobA-related protein {ECO:0000313|EMBL:EGP06914.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
molybdopterin binding domain-containing protein
|