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SCNpilot_expt_500_bf_scaffold_11684

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_11684_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1316)
DNA (1314bp) protein (438aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
leucyl-tRNA synthetase n=1 Tax=Afipia birgiae RepID=UPI000303F9B7
Leucyl-tRNA synthetase {ECO:0000313|EMBL:KIZ39631.1}; Flags: Fragment;; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_expt_500_bf_scaffold_11684_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1479..2876)
DNA (1398bp) protein (466aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1T7_9BRAD rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS34679.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cph; phytochrome-like protein Cph rbh
SCNpilot_expt_500_bf_scaffold_11684_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2933..3124)
DNA (192bp) protein (64aa)
diguanylate cyclase n=1 Tax=Afipia birgiae RepID=UPI0002D8BACA
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS34679.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cph; phytochrome-like protein Cph
SCNpilot_expt_500_bf_scaffold_11684_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3234..3923
DNA (690bp) protein (230aa)
YggS family pyridoxal phosphate enzyme n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8I3_9BRAD rbh
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EKS34678.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K06997
SCNpilot_expt_500_bf_scaffold_11684_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4058..4627)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWG6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34677.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_11684_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4758..5444
DNA (687bp) protein (229aa)
DNA-binding response regulator n=2 Tax=Bradyrhizobiaceae RepID=F7QHC7_9BRAD rbh
DNA-binding response regulator {ECO:0000313|EMBL:EGP09416.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
two-component response regulator rbh
SCNpilot_expt_500_bf_scaffold_11684_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5526..5921
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4T7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34675.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cyclic nucleotide-binding domain-containing protein
SCNpilot_expt_500_bf_scaffold_11684_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6045..6860)
DNA (816bp) protein (272aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EGP09418.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EGP09418.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
exodeoxyribonuclease III (xthA) (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Exodeoxyribonuclease III n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QHC9_9BRAD rbh
SCNpilot_expt_500_bf_scaffold_11684_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6956..7327)
DNA (372bp) protein (124aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI00031C556C
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
outer membrane lipoprotein carrier protein LolA
SCNpilot_expt_500_bf_scaffold_11684_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7303..7731)
DNA (429bp) protein (143aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI00031C556C
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative outer membrane lipoprotein carrier
SCNpilot_expt_500_bf_scaffold_11684_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7807..9063)
DNA (1257bp) protein (419aa)
DNA translocase ftsK n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZL9_9BRAD
Cell division protein FtsK {ECO:0000313|EMBL:EGP09420.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
Displaying 11 items

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