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SCNpilot_expt_500_bf_scaffold_8013

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8013_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIV4_9BRAD
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EGP08917.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_expt_500_bf_scaffold_8013_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(95..394)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2D5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32598.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8013_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(431..1519)
DNA (1089bp) protein (363aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ureC; urease subunit alpha (EC:3.5.1.5); K01428 urease subunit alpha [EC:3.5.1.5]
urease subunit alpha n=1 Tax=Afipia birgiae RepID=UPI00030A4D79
SCNpilot_expt_500_bf_scaffold_8013_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1520..2146)
DNA (627bp) protein (209aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ureC; urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5]
urease subunit alpha n=1 Tax=Afipia birgiae RepID=UPI00030A4D79
SCNpilot_expt_500_bf_scaffold_8013_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2244..2549)
DNA (306bp) protein (102aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ureB; urease subunit beta (EC:3.5.1.5); K01429 urease subunit beta [EC:3.5.1.5]
Urease subunit beta n=3 Tax=Bradyrhizobiaceae RepID=F7QIV1_9BRAD
SCNpilot_expt_500_bf_scaffold_8013_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2559..2861)
DNA (303bp) protein (101aa)
ureA; urease subunit gamma; K01430 urease subunit gamma [EC:3.5.1.5]
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Urease subunit gamma n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NYT9_9BRAD
SCNpilot_expt_500_bf_scaffold_8013_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2897..3730)
DNA (834bp) protein (278aa)
Urease accessory protein UreD n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NVR1_9BRAD rbh
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ureD; urease accessory protein; K03190 urease accessory protein rbh
SCNpilot_expt_500_bf_scaffold_8013_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3759..4418)
DNA (660bp) protein (220aa)
branched-chain amino acid ABC transporter ATP-binding protein (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein rbh
Urea ABC transporter, ATP-binding protein UrtE n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2D0_9BRAD rbh
Urea ABC transporter, ATP-binding protein UrtE {ECO:0000313|EMBL:EKS32593.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_500_bf_scaffold_8013_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4567..5328)
DNA (762bp) protein (254aa)
Urea ABC transporter, ATP-binding protein UrtD n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P039_9BRAD rbh
Urea ABC transporter, ATP-binding protein UrtD {ECO:0000313|EMBL:EKS34114.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_expt_500_bf_scaffold_8013_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5333..5725)
DNA (393bp) protein (131aa)
Urea ABC transporter, permease protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIU6_9BRAD
Urea ABC transporter, permease protein {ECO:0000313|EMBL:EGP08909.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Displaying 10 items

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