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SCNpilot_expt_500_bf_scaffold_10772

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10772_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..613)
DNA (612bp) protein (204aa)
UPI0003CF3E4D related cluster n=1 Tax=unknown RepID=UPI0003CF3E4D
Phosphate starvation protein PhoH {ECO:0000313|EMBL:ESW85654.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
SCNpilot_expt_500_bf_scaffold_10772_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(600..1037)
DNA (438bp) protein (146aa)
Phosphate starvation-induced protein PhoH n=2 Tax=Rhizobium loti RepID=Q98BK2_RHILO
phosphate starvation-induced protein phoH; K06217 phosphate starvation-inducible protein PhoH and related proteins
Phosphate starvation-induced protein PhoH {ECO:0000313|EMBL:BAB51970.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_500_bf_scaffold_10772_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1037..2416)
DNA (1380bp) protein (460aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBY5_9RHIZ rbh
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA rbh
SCNpilot_expt_500_bf_scaffold_10772_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2505..3065)
DNA (561bp) protein (187aa)
HAD hydrolase, family IA n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P431_9BRAD
HAD hydrolase, family IA {ECO:0000313|EMBL:EKS33188.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
HAD family hydrolase
SCNpilot_expt_500_bf_scaffold_10772_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3114..3578)
DNA (465bp) protein (155aa)
Manganese uptake regulation protein Mur n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI93_9BRAD rbh
Manganese uptake regulation protein Mur {ECO:0000313|EMBL:EGP08984.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
SCNpilot_expt_500_bf_scaffold_10772_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3625..4131)
DNA (507bp) protein (169aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NX65_9BRAD
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EKS34932.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_500_bf_scaffold_10772_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4133..4825)
DNA (693bp) protein (231aa)
Putative molecular chaperone n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI95_9BRAD rbh
Putative molecular chaperone {ECO:0000313|EMBL:EGP08986.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
peptidase M22 glycoprotease
SCNpilot_expt_500_bf_scaffold_10772_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5006..5572)
DNA (567bp) protein (189aa)
iron transporter n=1 Tax=Afipia birgiae RepID=UPI0002D6F3CC rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34934.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
nfu; NFU iron-sulfur cluster scaffold-like protein
SCNpilot_expt_500_bf_scaffold_10772_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5695..6189)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5I6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34935.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10772_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6280..7317)
DNA (1038bp) protein (346aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophan--tRNA ligase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXJ3_9BRAD rbh
SCNpilot_expt_500_bf_scaffold_10772_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7601..8137)
DNA (537bp) protein (179aa)
Integral membrane protein MviN n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0K3_9BRAD
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
virulence factor MviN-like protein; K03980 virulence factor
SCNpilot_expt_500_bf_scaffold_10772_12
unknown

Not on your lists

8516..8836
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10772_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9177..10178
DNA (1002bp) protein (334aa)
Fructokinase {ECO:0000313|EMBL:EGP08991.1}; EC=2.7.1.4 {ECO:0000313|EMBL:EGP08991.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Fructokinase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIA0_9BRAD rbh
PfkB protein
SCNpilot_expt_500_bf_scaffold_10772_14
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10360..10689
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NS57_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08992.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10772_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10724..11440)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5J1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34940.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10772_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11440..12906)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P442_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33198.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_10772_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14193..14786
DNA (594bp) protein (198aa)
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI000306D8DC rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34942.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_500_bf_scaffold_10772_18
unknown

Not on your lists

15331..15480
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10772_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15511..16428)
DNA (918bp) protein (306aa)
pirin n=1 Tax=Afipia birgiae RepID=UPI0003025B71 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33202.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Pirin-like protein; K06911
SCNpilot_expt_500_bf_scaffold_10772_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16457..17833)
DNA (1377bp) protein (459aa)
malonyl-CoA decarboxylase; K01578 malonyl-CoA decarboxylase [EC:4.1.1.9] rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2J6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34944.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_500_bf_scaffold_10772_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17964..19313)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXK7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33204.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10772_22
unknown

Not on your lists

comp(19436..19528)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 22 items

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