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SCNpilot_expt_500_bf_scaffold_12317

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12317_1
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14..229
DNA (216bp) protein (72aa)
Probable integrase/recombinase protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K650_RHIEC
integrase/recombinase
Probable integrase/recombinase protein {ECO:0000313|EMBL:ABC91686.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCNpilot_expt_500_bf_scaffold_12317_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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449..676
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NTN1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS31824.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_500_bf_scaffold_12317_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1765..2820)
DNA (1056bp) protein (352aa)
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07K16_RHOP5
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABJ07718.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_expt_500_bf_scaffold_12317_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2848..3801)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003721DDC
twin-arginine translocation pathway signal
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_expt_500_bf_scaffold_12317_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3862..4431)
DNA (570bp) protein (190aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.14); K01474 N-methylhydantoinase B [EC:3.5.2.14]
N-methylhydantoinase B/acetone carboxylase, alpha subunit n=1 Tax=Pseudomonas sp. GM79 RepID=J3I7R4_9PSED
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_expt_500_bf_scaffold_12317_6
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4526..5566)
DNA (1041bp) protein (347aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.14); K01474 N-methylhydantoinase B [EC:3.5.2.14]
N-methylhydantoinase B/acetone carboxylase, alpha subunit n=1 Tax=Pseudomonas sp. GM79 RepID=J3I7R4_9PSED
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_expt_500_bf_scaffold_12317_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5559..6224)
DNA (666bp) protein (222aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.14); K01473 N-methylhydantoinase A [EC:3.5.2.14]
N-methylhydantoinase A/acetone carboxylase, beta subunit n=1 Tax=Pseudomonas sp. GM79 RepID=J2WZG8_9PSED
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_expt_500_bf_scaffold_12317_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6227..7126)
DNA (900bp) protein (300aa)
hyuA; N-methylhydantoinase A (EC:3.5.2.14); K01473 N-methylhydantoinase A [EC:3.5.2.14]
N-methylhydantoinase A/acetone carboxylase, beta subunit n=1 Tax=Pseudomonas sp. GM79 RepID=J2WZG8_9PSED
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying 8 items

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