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SCNpilot_expt_500_bf_scaffold_18682

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_18682_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1210
DNA (1209bp) protein (403aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
signal transduction histidine kinase; K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
Periplasmic sensor signal transduction histidine kinase n=2 Tax=Bradyrhizobiaceae RepID=F7QLJ2_9BRAD
SCNpilot_expt_500_bf_scaffold_18682_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1232..1462
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000376664B
Uncharacterized protein {ECO:0000313|EMBL:EGP07844.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K06938
SCNpilot_expt_500_bf_scaffold_18682_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1756..1965
DNA (210bp) protein (70aa)
TIGR02281 family clan AA aspartic protease n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUZ3_9BRAD
TIGR02281 family clan AA aspartic protease {ECO:0000313|EMBL:EKS42193.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_18682_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2178..2963)
DNA (786bp) protein (262aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
yjbN; tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-]
tRNA-dihydrouridine synthase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLI9_9BRAD
SCNpilot_expt_500_bf_scaffold_18682_5
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3074..3745
DNA (672bp) protein (224aa)
Shufflon-specific DNA recombinase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8F4_9RHIZ
Putative integrase/recombinase {ECO:0000313|EMBL:CDN48092.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
integrase/recombinase
SCNpilot_expt_500_bf_scaffold_18682_6
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3727..4101
DNA (375bp) protein (125aa)
UPI0003D1A0F2 related cluster n=1 Tax=unknown RepID=UPI0003D1A0F2
Chorismate mutase {ECO:0000313|EMBL:KFI27043.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
integrase/recombinase
SCNpilot_expt_500_bf_scaffold_18682_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4248..4604
DNA (357bp) protein (119aa)
Phage transcriptional regulator, AlpA n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YH42_9RHIZ
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:EHH08371.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
phage transcriptional regulator AlpA; K07733 prophage regulatory protein
Displaying 7 items

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