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SCNpilot_expt_500_bf_scaffold_756

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_756_1
unknown

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2..229
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_2
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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443..682
DNA (240bp) protein (80aa)
GK22567 gene product from transcript GK22567-RA; K14191 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
Putative dimethyladenosine transferase n=1 Tax=Crassostrea gigas RepID=K1PRP0_CRAGI
Putative dimethyladenosine transferase {ECO:0000313|EMBL:EKC26947.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_756_3
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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1040..1195
DNA (156bp) protein (52aa)
similar to putative dimethyladenosine transferase; K14191 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
Putative dimethyladenosine transferase n=1 Tax=Crassostrea gigas RepID=K1PZ81_CRAGI
Putative dimethyladenosine transferase {ECO:0000313|EMBL:EKC26948.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_756_4
Placozoa sp. H4, Placozoa, Metazoa

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comp(2226..2387)
DNA (162bp) protein (54aa)
60S ribosomal protein L12b n=1 Tax=Placozoa sp. H4 RepID=M4T7Z3_9METZ
60S ribosomal protein L12b {ECO:0000313|EMBL:AGH70159.1}; TaxID=1034858 species="Eukaryota; Metazoa; Placozoa; unclassified Placozoa.;" source="Placozoa sp. H4.;"
60S ribosomal protein L12; K02870 large subunit ribosomal protein L12e
SCNpilot_expt_500_bf_scaffold_756_5
unknown

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comp(2494..2649)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_6
unknown

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comp(3238..3774)
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_7
unknown

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4207..4521
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_8
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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comp(5483..6061)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4A5B6_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO88441.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
uncharacterized LOC100635860
SCNpilot_expt_500_bf_scaffold_756_9
Mus musculus, Mus, Rodentia, Mammalia, Chordata, Metazoa

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comp(7395..7730)
DNA (336bp) protein (112aa)
PREDICTED: thioredoxin domain-containing protein 5 n=1 Tax=Trichechus manatus latirostris RepID=UPI0002C463F7
Txndc5, AL022641, ERp46, PC-TRP; thioredoxin domain containing 5; K13984 thioredoxin domain-containing protein 5
Thioredoxin domain-containing protein 5 {ECO:0000313|Ensembl:ENSMUSP00000124401}; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.;" source="Mus musculus (Mouse).;"
SCNpilot_expt_500_bf_scaffold_756_10
unknown

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comp(7805..7948)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_11
Musca domestica, Musca, Diptera, Neoptera, Arthropoda, Metazoa

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comp(8070..8396)
DNA (327bp) protein (109aa)
Thioredoxin {ECO:0000313|EMBL:AFP60666.1}; TaxID=7370 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Musca.;" source="Musca domestica (House fly).;"
SCNpilot_expt_500_bf_scaffold_756_12
unknown

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comp(8426..8539)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_13
unknown

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comp(9253..9534)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_14
unknown

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comp(9567..10103)
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_15
unknown

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comp(10283..10990)
DNA (708bp) protein (236aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_16
unknown

Not on your lists

11131..11352
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_17
Anopheles darlingi, Anopheles, Diptera, Neoptera, Arthropoda, Metazoa

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comp(11771..13900)
DNA (2130bp) protein (710aa)
PREDICTED: similar to transportin 1 isoform 2 n=1 Tax=Tribolium castaneum RepID=UPI0000D5736E rbh
TNPO1; transportin 1 rbh
Importin beta-2 {ECO:0000313|EMBL:ETN63269.1}; Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ADAC005021-PA}; TaxID=43151 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles.;" source="Anopheles darlingi (Mosquito).;"
SCNpilot_expt_500_bf_scaffold_756_18
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(13991..14575)
DNA (585bp) protein (195aa)
Transportin-1 n=1 Tax=Crassostrea gigas RepID=K1Q880_CRAGI
Transportin-1 {ECO:0000313|EMBL:EKC30138.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
TNPO1, NV12765; transportin 1
SCNpilot_expt_500_bf_scaffold_756_19
unknown

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14880..15077
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_756_20
Xenopus laevis, Xenopus, Anura, Amphibia, Chordata, Metazoa

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15595..16065
DNA (471bp) protein (157aa)
PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X7 n=1 Tax=Chrysemys picta bellii RepID=UPI000388A982
arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like; K12491 Arf-GAP, GTPase, ANK repeat and PH domain-containing protein 1/2/3
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1; Short=AGAP-1;; Centaurin-gamma-2; Short=Cnt-g2;; TaxID=8355 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.;" source="Xenopus laevis (African clawed frog).;"
SCNpilot_expt_500_bf_scaffold_756_21
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

16116..16343
DNA (228bp) protein (76aa)
Centaurin-gamma-1A n=1 Tax=Crassostrea gigas RepID=K1QPI3_CRAGI
Centaurin-gamma-1A {ECO:0000313|EMBL:EKC33009.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
centaurin gamma; K12491 Arf-GAP, GTPase, ANK repeat and PH domain-containing protein 1/2/3
SCNpilot_expt_500_bf_scaffold_756_22
unknown

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17673..17942
DNA (270bp) protein (90aa)

This feature has no annotations

Displaying 22 items

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