ggKbase home page

SCNpilot_expt_500_bf_scaffold_1078

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1078_1
unknown

Not on your lists

2..103
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_2
unknown

Not on your lists

comp(70..273)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_3
unknown

Not on your lists

comp(1280..1657)
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_4
unknown

Not on your lists

2060..2827
DNA (768bp) protein (256aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_5
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

2875..3348
DNA (474bp) protein (158aa)
fut1; fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group); K00718 galactoside 2-L-fucosyltransferase 1/2 [EC:2.4.1.69]
Galactoside 2-alpha-L-fucosyltransferase 1 n=1 Tax=Crassostrea gigas RepID=K1QDW7_CRAGI
Galactoside 2-alpha-L-fucosyltransferase 1 {ECO:0000313|EMBL:EKC26995.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_1078_6
unknown

Not on your lists

comp(3566..3862)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_7
Apis mellifera, Apis, Hymenoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(4059..4403)
DNA (345bp) protein (115aa)
SNF1A; SNF1A/AMP-activated protein kinase; K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]
Uncharacterized protein n=1 Tax=Apis mellifera RepID=H9KDF1_APIME
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:GB43553-PA}; TaxID=7460 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis.;" source="Apis mellifera (Honeybee).;"
SCNpilot_expt_500_bf_scaffold_1078_8
Stegodyphus mimosarum, Stegodyphus, Araneae, Arachnida, Arthropoda, Metazoa

Not on your lists

comp(4818..5048)
DNA (231bp) protein (77aa)
5'-AMP-activated protein kinase catalytic subunit alpha-2 {ECO:0000313|EMBL:KFM77241.1}; Flags: Fragment;; TaxID=407821 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Eresoidea; Eresidae; Stegodyphus.;" source="Stegodyphus mimosarum.;"
SCNpilot_expt_500_bf_scaffold_1078_9
Pristionchus pacificus, Pristionchus, Diplogasterida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(6028..6210)
DNA (183bp) protein (61aa)
NV13517; 5'-AMP-activated protein kinase catalytic subunit alpha-2-like; K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]
Uncharacterized protein n=1 Tax=Pristionchus pacificus RepID=H3FYH0_PRIPA
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PPA27364}; TaxID=54126 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Diplogasterida; Neodiplogasteridae; Pristionchus.;" source="Pristionchus pacificus (Parasitic nematode).;"
SCNpilot_expt_500_bf_scaffold_1078_10
unknown

Not on your lists

7348..7809
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_11
unknown

Not on your lists

7824..8288
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_12
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

10068..10442
DNA (375bp) protein (125aa)
UPF0636 protein C4orf41-like protein n=1 Tax=Crassostrea gigas RepID=K1QH15_CRAGI
UPF0636 protein C4orf41-like protein {ECO:0000313|EMBL:EKC33178.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
tchp; trichoplein, keratin filament binding
SCNpilot_expt_500_bf_scaffold_1078_13
unknown

Not on your lists

10784..10951
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_14
unknown

Not on your lists

11078..11308
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_15
Daphnia pulex, Daphnia, Diplostraca, Phyllopoda, Arthropoda, Metazoa

Not on your lists

comp(11791..12711)
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9GKY3_DAPPU
Chloride channel protein {ECO:0000256|RuleBase:RU361221}; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.;" source="Daphnia pulex (Water flea).;"
CLCN3; chloride channel, voltage-sensitive 3; K05012 chloride channel 3
SCNpilot_expt_500_bf_scaffold_1078_16
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(12815..13384)
DNA (570bp) protein (190aa)
H(+)/Cl(-) exchange transporter 3 n=1 Tax=Crassostrea gigas RepID=K1QDM5_CRAGI
Chloride channel protein {ECO:0000256|RuleBase:RU361221}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
NV16826; H(+)/Cl(-) exchange transporter 3-like; K05012 chloride channel 3
SCNpilot_expt_500_bf_scaffold_1078_17
Acanthisitta chloris, Acanthisitta, Passeriformes, Aves, Chordata, Metazoa

Not on your lists

comp(13405..13695)
DNA (291bp) protein (97aa)
PREDICTED: H(+)/Cl(-) exchange transporter 3-like n=1 Tax=Aplysia californica RepID=UPI00035A1EE7
Chloride channel protein {ECO:0000256|RuleBase:RU361221}; Flags: Fragment;; TaxID=57068 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Acanthisittidae; Acanthisitta.;" source="Acanthisitta chloris (rifleman).;"
H(+)/Cl(-) exchange transporter 5-like
SCNpilot_expt_500_bf_scaffold_1078_18
unknown

Not on your lists

comp(14223..14531)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_19
unknown

Not on your lists

17237..17410
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_20
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17757..18050
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3A454
Uncharacterized protein {ECO:0000313|EMBL:KIG14981.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1078_21
Latimeria chalumnae, Latimeria, Coelacanthiformes, Chordata, Metazoa

Not on your lists

comp(18332..19471)
DNA (1140bp) protein (380aa)
PREDICTED: fizzy-related protein homolog isoform X1 n=1 Tax=Latimeria chalumnae RepID=UPI0003C157EE rbh
Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000003730}; TaxID=7897 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria.;" source="Latimeria chalumnae (West Indian ocean coelacanth).;"
fizzy-related protein homolog rbh
SCNpilot_expt_500_bf_scaffold_1078_22
unknown

Not on your lists

comp(19502..20098)
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_23
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

20691..21062
DNA (372bp) protein (124aa)
Vcbs-like protein n=1 Tax=Philodina roseola RepID=B3G4P0_PHIRO
Vcbs-like protein {ECO:0000313|EMBL:ACD54788.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1078_24
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(21089..21889)
DNA (801bp) protein (267aa)
NHL repeat protein-like protein n=1 Tax=Adineta vaga RepID=B3G4D1_ADIVA
NHL repeat protein-like protein {ECO:0000313|EMBL:ACD54679.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
NHL repeat containing protein
SCNpilot_expt_500_bf_scaffold_1078_25
unknown

Not on your lists

comp(21999..22301)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1078_26
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22282..22785)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYZ5_9BACT
peptidase C14 caspase catalytic subunit p20
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Displaying 26 items

View Taxonomy