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SCNpilot_expt_500_bf_scaffold_1247

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1247_1
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

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comp(2..232)
DNA (231bp) protein (77aa)
Ferrochelatase {ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|RuleBase:RU000607};; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
Ferrochelatase n=1 Tax=Amphimedon queenslandica RepID=I1G135_AMPQE
ferrochelatase, mitochondrial-like
SCNpilot_expt_500_bf_scaffold_1247_2
Amblyomma triste, Amblyomma, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

comp(997..1296)
DNA (300bp) protein (100aa)
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit {ECO:0000256|RuleBase:RU361142}; Short=Oligosaccharyl transferase 48 kDa subunit {ECO:0000256|RuleBase:RU361142};; EC=2.4.99.18 {ECO:0000256|RuleBase:RU361142};; TaxID=251400 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Amblyomminae; Amblyomma.;" source="Amblyomma triste.;"
dolichyl-di-phosphooligosaccharide protein glycotransferase, putative (EC:2.4.1.119); K12670 oligosaccharyltransferase complex subunit beta
Putative dolichyl-diphosphooligosaccharide protein glycosyltransfer n=1 Tax=Rhipicephalus pulchellus RepID=L7M579_9ACAR
SCNpilot_expt_500_bf_scaffold_1247_3
unknown

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1929..2438
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_4
unknown

Not on your lists

2867..3349
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_5
unknown

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comp(4231..4398)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_6
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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comp(4567..4785)
DNA (219bp) protein (73aa)
26S protease regulatory subunit 7 n=1 Tax=Crassostrea gigas RepID=K1Q1I2_CRAGI
26S protease regulatory subunit 7 {ECO:0000313|EMBL:EKC22660.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
hypothetical protein ; K03061 26S proteasome regulatory subunit T1
SCNpilot_expt_500_bf_scaffold_1247_7
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

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comp(4782..5150)
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Strongylocentrotus purpuratus RepID=H3JDN1_STRPU
uncharacterized LOC589870; K03061 26S proteasome regulatory subunit T1
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_024670-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCNpilot_expt_500_bf_scaffold_1247_8
Arundo donax, Arundo, Poales, commelinids, Streptophyta, Viridiplantae

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5386..5778
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:JAE65045.1}; TaxID=35708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Arundinoideae; Arundineae; Arundo.;" source="Arundo donax (Giant reed) (Donax arundinaceus).;"
SCNpilot_expt_500_bf_scaffold_1247_9
unknown

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comp(6023..6148)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_10
unknown

Not on your lists

6654..6848
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_11
unknown

Not on your lists

8188..8382
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_12
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

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8963..9322
DNA (360bp) protein (120aa)
PREDICTED: hypothetical protein n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBF85
Uncharacterized protein {ECO:0000313|EMBL:CEK77114.1}; Flags: Fragment;; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommatophora; Sigmurethra; Arionoidea; Arionidae; Arion.;" source="Arion vulgaris.;"
Ttc18, 5330402L21Rik; tetratricopeptide repeat domain 18
SCNpilot_expt_500_bf_scaffold_1247_13
unknown

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9617..9895
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_14
unknown

Not on your lists

comp(11640..11852)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_15
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(12461..12601)
DNA (141bp) protein (47aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E661_HORVD
Predicted protein {ECO:0000313|EMBL:BAK02833.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_1247_16
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(12832..13650)
DNA (819bp) protein (273aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E661_HORVD rbh
Predicted protein {ECO:0000313|EMBL:BAK02833.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_1247_17
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(13774..14436)
DNA (663bp) protein (221aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E661_HORVD
Predicted protein {ECO:0000313|EMBL:BAK02833.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_1247_18
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(14552..14806)
DNA (255bp) protein (85aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E661_HORVD
Predicted protein {ECO:0000313|EMBL:BAK02833.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_1247_19
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(15157..15393)
DNA (237bp) protein (79aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E661_HORVD
Predicted protein {ECO:0000313|EMBL:BAK02833.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_1247_20
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(16148..16429)
DNA (282bp) protein (94aa)
Zinc finger SWIM domain-containing protein 2 n=1 Tax=Crassostrea gigas RepID=K1QGD5_CRAGI
Zinc finger SWIM domain-containing protein 2 {ECO:0000313|EMBL:EKC20601.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
RING zinc finger-containing protein
SCNpilot_expt_500_bf_scaffold_1247_21
unknown

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comp(16462..16974)
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_22
unknown

Not on your lists

comp(17101..17268)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_23
unknown

Not on your lists

17917..18213
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_24
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(18464..18754)
DNA (291bp) protein (97aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2DJ50_HORVD
Predicted protein {ECO:0000313|EMBL:BAJ95121.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_1247_25
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(18871..19716)
DNA (846bp) protein (282aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2DJ50_HORVD
Predicted protein {ECO:0000313|EMBL:BAJ95121.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_1247_26
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(19960..20403)
DNA (444bp) protein (148aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2DJ50_HORVD
Predicted protein {ECO:0000313|EMBL:BAJ95121.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1247_27
unknown

Not on your lists

20823..21119
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1247_28
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(21291..21692)
DNA (402bp) protein (134aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2DJ50_HORVD
Predicted protein {ECO:0000313|EMBL:BAJ95121.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_1247_29
unknown

Not on your lists

21737..21889
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 29 items

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