ggKbase home page

SCNpilot_expt_500_bf_scaffold_1331

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1331_1
Drosophila mojavensis, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(1733..1933)
DNA (201bp) protein (67aa)
GI17241 gene product from transcript GI17241-RA; K01205 alpha-N-acetylglucosaminidase [EC:3.2.1.50]
GI17241 n=1 Tax=Drosophila mojavensis RepID=B4KKH5_DROMO
GI17241 {ECO:0000313|EMBL:EDW11625.1}; TaxID=7230 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila.;" source="Drosophila mojavensis (Fruit fly).;"
SCNpilot_expt_500_bf_scaffold_1331_2
unknown

Not on your lists

comp(2022..2174)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1331_3
unknown

Not on your lists

comp(2262..2489)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1331_4
Oryzias latipes, Oryzias, Beloniformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(2677..2829)
DNA (153bp) protein (51aa)
Uncharacterized protein (Fragment) n=2 Tax=Oryzias latipes RepID=H2MH24_ORYLA
alpha-N-acetylglucosaminidase-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSORLP00000017921}; TaxID=8090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias.;" source="Oryzias latipes (Japanese rice fish) (Japanese killifish).;"
SCNpilot_expt_500_bf_scaffold_1331_5
Rhinocladiella mackenziei, Rhinocladiella, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

comp(3513..3671)
DNA (159bp) protein (53aa)
similar to Alpha-N-acetylglucosaminidase precursor (N-acetyl-alpha-glucosaminidase) (NAG); K01205 alpha-N-acetylglucosaminidase [EC:3.2.1.50]
PREDICTED: alpha-N-acetylglucosaminidase-like n=1 Tax=Bombus terrestris RepID=UPI00021A71C8
Rhinocladiella mackenziei CBS 650.93 unplaced genomic scaffold supercont1.10, whole genome shotgun sequence {ECO:0000313|EMBL:KIW99859.1}; TaxID=1442369 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Rhinocladiella.;" source="Rhinocladiella mackenziei CBS 650.93.;"
SCNpilot_expt_500_bf_scaffold_1331_6
unknown

Not on your lists

comp(4178..4489)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1331_7
Charadrius vociferus, Charadrius, Charadriiformes, Aves, Chordata, Metazoa

Not on your lists

comp(4943..5221)
DNA (279bp) protein (93aa)
PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 isoform X2 n=1 Tax=Melopsittacus undulatus RepID=UPI00038324F1
PSMD12; proteasome (prosome, macropain) 26S subunit, non-ATPase, 12; K03035 26S proteasome regulatory subunit N5
26S proteasome non-ATPase regulatory subunit 12 {ECO:0000313|EMBL:KGL87771.1}; Flags: Fragment;; TaxID=50402 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius.;" source="Charadrius vociferus (Killdeer) (Aegialitis vocifera).;"
SCNpilot_expt_500_bf_scaffold_1331_8
Toxocara canis, Toxocara, Ascaridida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(5164..5418)
DNA (255bp) protein (85aa)
26S proteasome non-ATPase regulatory subunit 12 {ECO:0000313|EMBL:KHN78922.1}; TaxID=6265 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Ascaridida; Ascaridoidea; Toxocaridae; Toxocara.;" source="Toxocara canis (Canine roundworm).;"
SCNpilot_expt_500_bf_scaffold_1331_9
Xiphophorus maculatus, Xiphophorus, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(5526..5750)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Xiphophorus maculatus RepID=M3ZWF0_XIPMA
Uncharacterized protein {ECO:0000313|Ensembl:ENSXMAP00000006544}; TaxID=8083 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus.;" source="Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).;"
26S proteasome non-ATPase regulatory subunit 12-like
SCNpilot_expt_500_bf_scaffold_1331_10
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

Not on your lists

comp(5755..5967)
DNA (213bp) protein (71aa)
26S proteasome non-ATPase regulatory subunit 12 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UHT8_SALR5
26S proteasome non-ATPase regulatory subunit 12 {ECO:0000313|EMBL:EGD76687.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
similar to proteasome 26S non-ATPase subunit 12; K03035 26S proteasome regulatory subunit N5
SCNpilot_expt_500_bf_scaffold_1331_11
unknown

Not on your lists

comp(5986..6135)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1331_12
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(6166..6357)
DNA (192bp) protein (64aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SCN9_NEMVE
hypothetical protein ; K03035 26S proteasome regulatory subunit N5
Predicted protein {ECO:0000313|EMBL:EDO38521.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_expt_500_bf_scaffold_1331_13
unknown

Not on your lists

comp(6537..6695)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1331_14
'Deinococcus soli' Cha et al. 2014, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7500..8924
DNA (1425bp) protein (475aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH18160.1}; TaxID=1309411 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et al. 2014.;"
SCNpilot_expt_500_bf_scaffold_1331_15
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(9371..9751)
DNA (381bp) protein (127aa)
Pre-mRNA-splicing regulator female-lethal(2)D (Fragment) n=1 Tax=Crassostrea gigas RepID=K1R2I1_CRAGI
pre-mRNA-splicing regulator female lethal D
Pre-mRNA-splicing regulator female-lethal(2)D {ECO:0000313|EMBL:EKC27986.1}; Flags: Fragment;; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_1331_16
Equus caballus, Equus, Perissodactyla, Mammalia, Chordata, Metazoa

Not on your lists

comp(9820..9990)
DNA (171bp) protein (57aa)
PREDICTED: pre-mRNA-splicing regulator WTAP-like n=2 Tax=Caprinae RepID=UPI00029D6A03
uncharacterized LOC101699843
Uncharacterized protein {ECO:0000313|Ensembl:ENSECAP00000003082}; TaxID=9796 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.;" source="Equus caballus (Horse).;"
SCNpilot_expt_500_bf_scaffold_1331_17
unknown

Not on your lists

comp(10016..10348)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1331_18
unknown

Not on your lists

10939..11487
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1331_19
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(11582..12154)
DNA (573bp) protein (191aa)
Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta RepID=R7UEV9_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU04504.1, ECO:0000313|EnsemblMetazoa:CapteP75599}; Flags: Fragment;; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
cyclin-dependent kinase 5 activator 1-like
SCNpilot_expt_500_bf_scaffold_1331_20
unknown

Not on your lists

comp(12788..13423)
DNA (636bp) protein (212aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1331_21
Maconellicoccus hirsutus, Maconellicoccus, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(16179..16442)
DNA (264bp) protein (88aa)
steroid dehydrogenase, putative (EC:1.1.1.62)
Putative uncharacterized protein (Fragment) n=1 Tax=Maconellicoccus hirsutus RepID=A3EXP2_MACHI
Putative uncharacterized protein {ECO:0000313|EMBL:ABN11952.1}; Flags: Fragment;; TaxID=177089 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Coccoidea; Pseudococcidae; Maconellicoccus.;" source="Maconellicoccus hirsutus (Pink hibiscus mealybug).;"
SCNpilot_expt_500_bf_scaffold_1331_22
unknown

Not on your lists

comp(16653..16775)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1331_23
unknown

Not on your lists

comp(16805..17008)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1331_24
Lygus hesperus, Lygus, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(17050..17250)
DNA (201bp) protein (67aa)
Inactive hydroxysteroid dehydrogenase-like protein 1 {ECO:0000313|EMBL:JAG31343.1}; TaxID=30085 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Miridae; Mirini; Lygus.;" source="Lygus hesperus (Western plant bug).;"
SCNpilot_expt_500_bf_scaffold_1331_25
Acyrthosiphon pisum, Acyrthosiphon, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

17509..17877
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Acyrthosiphon pisum RepID=J9JM96_ACYPI
splicing factor U2af 38 kDa subunit-like; K12836 splicing factor U2AF 35 kDa subunit
ACYPI001339 protein {ECO:0000313|EMBL:BAH72001.1}; TaxID=7029 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon.;" source="Acyrthosiphon pisum (Pea aphid).;"
SCNpilot_expt_500_bf_scaffold_1331_26
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

17893..18183
DNA (291bp) protein (97aa)
Splicing factor U2AF 26 kDa subunit n=1 Tax=Crassostrea gigas RepID=K1QZ58_CRAGI
Splicing factor U2AF 26 kDa subunit {ECO:0000313|EMBL:EKC34075.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
hypothetical protein ; K12836 splicing factor U2AF 35 kDa subunit
SCNpilot_expt_500_bf_scaffold_1331_27
Stegodyphus mimosarum, Stegodyphus, Araneae, Arachnida, Arthropoda, Metazoa

Not on your lists

18429..18956
DNA (528bp) protein (176aa)
Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}; EC=3.1.3.16 {ECO:0000256|RuleBase:RU004273};; Flags: Fragment;; TaxID=407821 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Eresoidea; Eresidae; Stegodyphus.;" source="Stegodyphus mimosarum.;"
NV14580; serine/threonine-protein phosphatase 6 catalytic subunit-like; K15498 serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
Serine/threonine-protein phosphatase n=1 Tax=Strigamia maritima RepID=T1JA19_STRMM
Displaying 27 items

View Taxonomy