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SCNpilot_expt_500_bf_scaffold_1344

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1344_1
Prevotella sp. CAG:617, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..144
DNA (144bp) protein (48aa)
Putative alpha-galactosidase n=1 Tax=Prevotella sp. CAG:617 RepID=R7PCA2_9BACT
Putative alpha-galactosidase {ECO:0000313|EMBL:CDF22500.1}; TaxID=1262933 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:617.;"
SCNpilot_expt_500_bf_scaffold_1344_2
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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comp(1272..2852)
DNA (1581bp) protein (527aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2DKV7_HORVD rbh
Predicted protein {ECO:0000313|EMBL:BAJ95728.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
protein neuralized-like
SCNpilot_expt_500_bf_scaffold_1344_3
Daphnia pulex, Daphnia, Diplostraca, Phyllopoda, Arthropoda, Metazoa

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3114..3518
DNA (405bp) protein (135aa)
PREDICTED: neuralized-like protein 4-like n=1 Tax=Metaseiulus occidentalis RepID=UPI0002658F26
NEURL4; neuralized homolog 4 (Drosophila)
Putative uncharacterized protein {ECO:0000313|EMBL:EFX70468.1}; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.;" source="Daphnia pulex (Water flea).;"
SCNpilot_expt_500_bf_scaffold_1344_4
unknown

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3795..4442
DNA (648bp) protein (216aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1344_5
Adineta vaga, Adineta, Adinetida, Bdelloidea, Rotifera, Metazoa

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4704..5744
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Adineta vaga RepID=B3G4Q2_ADIVA
Putative uncharacterized protein {ECO:0000313|EMBL:ACD54800.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) (Callidina vaga).;"
SCNpilot_expt_500_bf_scaffold_1344_6
unknown

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6442..7674
DNA (1233bp) protein (411aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1344_7
unknown

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8031..8384
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1344_8
unknown

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comp(8515..8910)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1344_9
unknown

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comp(9032..9427)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1344_10
unknown

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comp(9540..9707)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1344_11
unknown

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comp(10903..11124)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1344_12
unknown

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comp(13687..13932)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1344_13
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

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comp(14735..15184)
DNA (450bp) protein (150aa)
hypothetical protein; K02327 DNA polymerase delta subunit 1 [EC:2.7.7.7]
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
DNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3Y5K6_BRAFL
SCNpilot_expt_500_bf_scaffold_1344_14
Panorpa takenouchii, Panorpa, Mecoptera, Neoptera, Arthropoda, Metazoa

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comp(15238..15369)
DNA (132bp) protein (44aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=115692 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Mecoptera; Panorpidae; Panorpa.;" source="Panorpa takenouchii.;"
DNA polymerase delta catalytic subunit; K02327 DNA polymerase delta subunit 1 [EC:2.7.7.7]
DNA polymerase n=1 Tax=Panorpa takenouchii RepID=E9RHS0_9NEOP
SCNpilot_expt_500_bf_scaffold_1344_15
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

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comp(15544..16539)
DNA (996bp) protein (332aa)
hypothetical protein; K02327 DNA polymerase delta subunit 1 [EC:2.7.7.7] rbh
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
DNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3Y5K6_BRAFL rbh
SCNpilot_expt_500_bf_scaffold_1344_16
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

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comp(17009..17146)
DNA (138bp) protein (46aa)
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_003650-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCNpilot_expt_500_bf_scaffold_1344_17
unknown

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comp(17175..17399)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1344_18
unknown

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comp(17448..17735)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1344_19
Oyamia lugubris, Oyamia, Plecoptera, Neoptera, Arthropoda, Metazoa

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comp(17772..18188)
DNA (417bp) protein (139aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=911390 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Plecoptera; Perloidea; Perlidae; Oyamia.;" source="Oyamia lugubris.;"
NV17782; DNA polymerase delta catalytic subunit-like; K02327 DNA polymerase delta subunit 1 [EC:2.7.7.7]
DNA polymerase n=1 Tax=Oyamia lugubris RepID=E9RHP6_9NEOP
SCNpilot_expt_500_bf_scaffold_1344_20
Setosphaeria turcica, Setosphaeria, Pleosporales, Pleosporomycetidae, Ascomycota, Fungi

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comp(18653..19432)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Setosphaeria turcica (strain 28A) RepID=R0KBZ5_SETT2
Uncharacterized protein {ECO:0000313|EMBL:EOA85752.1}; TaxID=671987 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Setosphaeria.;" source="Setosphaeria turcica (strain 28A) (Northern leaf blight fungus); (Exserohilum turcicum).;"
SCNpilot_expt_500_bf_scaffold_1344_21
Oreochromis niloticus, Oreochromis, Cichliformes, Neopterygii, Chordata, Metazoa

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comp(19538..21037)
DNA (1500bp) protein (500aa)
hypothetical protein; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] rbh
PREDICTED: probable glutamate--tRNA ligase, mitochondrial, partial n=1 Tax=Columba livia RepID=UPI0003992545 rbh
Uncharacterized protein {ECO:0000313|Ensembl:ENSONIP00000004872}; TaxID=8128 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis.;" source="Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).;"
SCNpilot_expt_500_bf_scaffold_1344_22
Tetranychus urticae, Tetranychus, Acari, Arthropoda, Metazoa

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comp(21091..21330)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Tetranychus urticae RepID=T1KGA3_TETUR
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:tetur11g00100.1}; TaxID=32264 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus.;" source="Tetranychus urticae (Two-spotted spider mite).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1344_23
unknown

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comp(22093..22167)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 23 items

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