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SCNpilot_expt_500_bf_scaffold_1379

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1379_1
unknown

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comp(3..485)
DNA (483bp) protein (161aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_2
Gasterosteus aculeatus, Gasterosteus, Perciformes, Neopterygii, Chordata, Metazoa

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comp(800..1270)
DNA (471bp) protein (157aa)
Uncharacterized protein (Fragment) n=1 Tax=Gasterosteus aculeatus RepID=G3NHH9_GASAC
Uncharacterized protein {ECO:0000313|Ensembl:ENSGACP00000004788}; Flags: Fragment;; TaxID=69293 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus.;" source="Gasterosteus aculeatus (Three-spined stickleback).;"
transcription intermediary factor 1-alpha-like
SCNpilot_expt_500_bf_scaffold_1379_3
unknown

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comp(1267..1497)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_4
Lygus hesperus, Lygus, Hemiptera, Neoptera, Arthropoda, Metazoa

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1717..3723
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Tetranychus urticae RepID=T1JZ06_TETUR
Histone-lysine N-methyltransferase eggless {ECO:0000313|EMBL:JAG20415.1}; Flags: Fragment;; TaxID=30085 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Miridae; Mirini; Lygus.;" source="Lygus hesperus (Western plant bug).;"
histone-lysine N-methyltransferase SETDB1-like
SCNpilot_expt_500_bf_scaffold_1379_5
unknown

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comp(3672..3875)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_6
Leptospira santarosai, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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4474..5793
DNA (1320bp) protein (440aa)
Leucine rich repeat protein n=1 Tax=Leptospira santarosai str. HAI134 RepID=M6SYW7_9LEPT
Leucine rich repeat protein {ECO:0000313|EMBL:EKO32216.1}; TaxID=1049984 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira santarosai str. MOR084.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1379_7
unknown

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6083..6337
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_8
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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6502..7527
DNA (1026bp) protein (342aa)
PREDICTED: malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Aplysia californica RepID=UPI00035A25F7
Malignant fibrous histiocytoma-amplified sequence 1-like protein {ECO:0000313|EMBL:EKC34929.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_1379_9
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

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12716..13204
DNA (489bp) protein (163aa)
Uncharacterized protein (Fragment) n=1 Tax=Helobdella robusta RepID=T1EGV5_HELRO
Uncharacterized protein {ECO:0000313|EMBL:ESO02726.1, ECO:0000313|EnsemblMetazoa:HelroP122743}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella.;" source="Helobdella robusta (Californian leech).;"
Spr; sex peptide receptor
SCNpilot_expt_500_bf_scaffold_1379_10
unknown

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13267..13680
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_11
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

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13686..14180
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7TW36_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELT95205.1, ECO:0000313|EnsemblMetazoa:CapteP154663}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1379_12
unknown

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comp(14611..14787)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_13
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

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comp(15117..15284)
DNA (168bp) protein (56aa)
Serine--pyruvate aminotransferase {ECO:0000256|PIRNR:PIRNR000524}; EC=2.6.1.44 {ECO:0000256|PIRNR:PIRNR000524};; EC=2.6.1.51 {ECO:0000256|PIRNR:PIRNR000524};; Alanine--glyoxylate aminotransferase {ECO:0000256|PIRNR:PIRNR000524}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SHM7_NEMVE
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1379_14
Acinetobacter rudis, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15281..15502)
DNA (222bp) protein (74aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=421052 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter rudis CIP 110305.;"
2-aminoethylphosphonate--pyruvate transaminase; K03430 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PS64_9BACE
SCNpilot_expt_500_bf_scaffold_1379_15
unknown

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15626..15787
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_16
unknown

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comp(16270..16710)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_17
unknown

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16901..17173
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_18
Xenopus (Silurana) tropicalis, Xenopus, Anura, Amphibia, Chordata, Metazoa

Not on your lists

comp(17219..17926)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Apis mellifera RepID=H9KGD6_APIME
potassium voltage-gated channel subfamily KQT member 1-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSXETP00000043172}; Flags: Fragment;; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.;" source="Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).;"
SCNpilot_expt_500_bf_scaffold_1379_19
Triatoma infestans, Triatoma, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(18019..18828)
DNA (810bp) protein (270aa)
PREDICTED: potassium voltage-gated channel subfamily KQT member 1-like n=1 Tax=Xenopus tropicalis RepID=UPI00034FC165
potassium voltage-gated channel subfamily KQT member 1-like
Putative potassium voltage-gated channel subfamily protein kqt member 1-like isoform 2 {ECO:0000313|EMBL:JAC16416.1}; Flags: Fragment;; TaxID=30076 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Reduviidae; Triatominae; Triatoma.;" source="Triatoma infestans (Assassin bug).;"
SCNpilot_expt_500_bf_scaffold_1379_20
Wuchereria bancrofti, Wuchereria, Spirurida, Chromadorea, Nematoda, Metazoa

Not on your lists

19216..19407
DNA (192bp) protein (64aa)
Serine/threonine-protein kinase C05D10.2 in chromosome III, putative (Fragment) n=2 Tax=Onchocercidae RepID=A8NY23_BRUMA
Serine/threonine-protein kinase C05D10.2 in chromosome III
Uncharacterized protein {ECO:0000313|EMBL:EJW71172.1}; Flags: Fragment;; TaxID=6293 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Wuchereria.;" source="Wuchereria bancrofti.;"
SCNpilot_expt_500_bf_scaffold_1379_21
Hydra vulgaris, Hydra, Anthoathecata, Hydroidolina, Cnidaria, Metazoa

Not on your lists

19596..19832
DNA (237bp) protein (79aa)
similar to MGC99048 protein; K08293 mitogen-activated protein kinase [EC:2.7.11.24]
Mitogen-activated protein kinase {ECO:0000256|RuleBase:RU361165, ECO:0000256|SAAS:SAAS00095919}; EC=2.7.11.24 {ECO:0000256|RuleBase:RU361165, ECO:0000256|SAAS:SAAS00095919};; TaxID=6087 species="Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra.;" source="Hydra vulgaris (Hydra) (Hydra attenuata).;"
Mitogen-activated protein kinase 15 n=1 Tax=Hydra vulgaris RepID=T2M8C8_HYDVU
SCNpilot_expt_500_bf_scaffold_1379_22
unknown

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20856..21092
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_23
unknown

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comp(22198..22392)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1379_24
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(22712..23149)
DNA (438bp) protein (146aa)
Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7RZV0_NEMVE
hypothetical protein ; K10407 kinesin light chain
Predicted protein {ECO:0000313|EMBL:EDO43009.1}; Flags: Fragment;; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_expt_500_bf_scaffold_1379_25
Latimeria chalumnae, Latimeria, Coelacanthiformes, Chordata, Metazoa

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comp(23146..24015)
DNA (870bp) protein (290aa)
PREDICTED: kinesin light chain 2 isoform 2 n=1 Tax=Trichechus manatus latirostris RepID=UPI0002C44DFB
Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000022954}; TaxID=7897 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria.;" source="Latimeria chalumnae (West Indian ocean coelacanth).;"
KLC2; kinesin light chain 2; K10407 kinesin light chain
SCNpilot_expt_500_bf_scaffold_1379_26
unknown

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comp(26712..26903)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 26 items

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