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SCNpilot_expt_500_bf_scaffold_1611

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1611_1
unknown

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comp(1218..1451)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_2
Rattus norvegicus, Rattus, Rodentia, Mammalia, Chordata, Metazoa

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2234..3046
DNA (813bp) protein (271aa)
Cadherin-related neuronal receptor 7 n=2 Tax=Rattus norvegicus RepID=Q767I5_RAT
Pcdha7, rCNRv07; protocadherin alpha 7
Cadherin-related neuronal receptor 7 {ECO:0000313|EMBL:BAD06372.1}; Protein Pcdha10 {ECO:0000313|Ensembl:ENSRNOP00000066774}; Protocadherin alpha 7 {ECO:0000313|EMBL:AAT77563.1}; TaxID=10116 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.;" source="Rattus norvegicus (Rat).;"
SCNpilot_expt_500_bf_scaffold_1611_3
Danio rerio, Danio, Cypriniformes, Neopterygii, Chordata, Metazoa

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3191..3934
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Danio rerio RepID=E7F9B5_DANRE
pcdh20; protocadherin 20
Uncharacterized protein {ECO:0000313|Ensembl:ENSDARP00000052911}; TaxID=7955 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio.;" source="Danio rerio (Zebrafish) (Brachydanio rerio).;"
SCNpilot_expt_500_bf_scaffold_1611_4
Nasonia vitripennis, Nasonia, Hymenoptera, Neoptera, Arthropoda, Metazoa

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3968..5149
DNA (1182bp) protein (394aa)
PREDICTED: fat-like cadherin-related tumor suppressor homolog n=1 Tax=Nasonia vitripennis RepID=UPI0002247D37
NV17510; fat-like cadherin-related tumor suppressor homolog
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:NV17510-PA}; TaxID=7425 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia.;" source="Nasonia vitripennis (Parasitic wasp).;"
SCNpilot_expt_500_bf_scaffold_1611_5
unknown

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6315..6791
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_6
unknown

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comp(6703..6894)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_7
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

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8132..8458
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Philodina roseola RepID=B6S346_PHIRO
Putative uncharacterized protein {ECO:0000313|EMBL:ACI90366.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1611_8
Otolemur garnettii, Otolemur, Primates, Mammalia, Chordata, Metazoa

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comp(9398..9691)
DNA (294bp) protein (98aa)
PREDICTED: Ubiquitin-related modifier 1 homolog n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBAA7C
Ubiquitin-related modifier 1 {ECO:0000256|HAMAP-Rule:MF_03048, ECO:0000256|RuleBase:RU361182}; TaxID=30611 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur.;" source="Otolemur garnettii (Small-eared galago) (Garnett's greater bushbaby).;"
ubiquitin-related modifier 1 homolog; K12161 ubiquitin related modifier 1
SCNpilot_expt_500_bf_scaffold_1611_9
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

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comp(10441..10959)
DNA (519bp) protein (173aa)
YTH domain family member 1-like protein n=1 Tax=Philodina roseola RepID=B6S347_PHIRO
YTH domain family member 1-like protein {ECO:0000313|EMBL:ACI90367.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
YTH domain family protein 1-like
SCNpilot_expt_500_bf_scaffold_1611_10
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(11163..11327)
DNA (165bp) protein (55aa)
YTH domain family member 1-like protein {ECO:0000313|EMBL:ACI90367.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
SCNpilot_expt_500_bf_scaffold_1611_11
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

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comp(11398..12507)
DNA (1110bp) protein (370aa)
YTH domain family member 1-like protein n=1 Tax=Philodina roseola RepID=B6S347_PHIRO
YTH domain family member 1-like protein {ECO:0000313|EMBL:ACI90367.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1611_12
unknown

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13370..13558
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_13
Heliconius cydno, Heliconius, Lepidoptera, Neoptera, Arthropoda, Metazoa

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13968..14312
DNA (345bp) protein (115aa)
Scy1 protein (Fragment) n=1 Tax=Heliconius cydno cordula RepID=D8VGG0_HELCY
Scy1 protein {ECO:0000313|EMBL:ADI82335.1}; Flags: Fragment;; TaxID=328831 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Heliconiinae; Heliconiini; Heliconius.;" source="Heliconius cydno cordula.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1611_14
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

14379..14771
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7UWG6_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU10963.1, ECO:0000313|EnsemblMetazoa:CapteP109432}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
similar to SCY1-like 2 protein
SCNpilot_expt_500_bf_scaffold_1611_15
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

14868..15059
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZKK1_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN47100.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_1611_16
unknown

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15201..15353
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_17
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

15543..15890
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZKK1_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN59643.1}; Flags: Fragment;; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_1611_18
unknown

Not on your lists

16032..16262
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_19
unknown

Not on your lists

16283..16849
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_20
unknown

Not on your lists

17375..17491
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_21
unknown

Not on your lists

18145..18828
DNA (684bp) protein (228aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_22
unknown

Not on your lists

19074..19640
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_23
unknown

Not on your lists

19607..19762
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1611_24
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

19815..20291
DNA (477bp) protein (159aa)
Tubulin-like protein n=1 Tax=Philodina roseola RepID=B6S365_PHIRO
Tubulin-like protein {ECO:0000313|EMBL:ACI90385.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
hypothetical protein ; K10389 tubulin gamma
SCNpilot_expt_500_bf_scaffold_1611_25
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

20298..20636
DNA (339bp) protein (113aa)
Tubulin-like protein n=1 Tax=Philodina roseola RepID=B6S365_PHIRO
Tubulin-like protein {ECO:0000313|EMBL:ACI90385.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
TUBD1; tubulin, delta 1
SCNpilot_expt_500_bf_scaffold_1611_26
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

20638..21087
DNA (450bp) protein (150aa)
Tubulin-like protein n=1 Tax=Philodina roseola RepID=B6S365_PHIRO
Tubulin-like protein {ECO:0000313|EMBL:ACI90385.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
similar to tubulin, delta 1; K10390 tubulin delta
SCNpilot_expt_500_bf_scaffold_1611_27
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

comp(21392..21553)
DNA (162bp) protein (54aa)
cAMP-dependent protein kinase typeII-alpha regulatory subunit-like protein n=1 Tax=Philodina roseola RepID=B6S366_PHIRO
cAMP-dependent protein kinase typeII-alpha regulatory subunit-like protein {ECO:0000313|EMBL:ACI90386.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
hypothetical protein; K15109 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
SCNpilot_expt_500_bf_scaffold_1611_28
unknown

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comp(21731..21883)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 28 items

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