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SCNpilot_expt_500_bf_scaffold_1724

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1724_1
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2..847)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W1K4_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX71992.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1724_2
unknown

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2395..4254
DNA (1860bp) protein (620aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_3
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4225..4983)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UKR7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP70335.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1724_4
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5011..5757)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UKR7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP70335.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1724_5
unknown

Not on your lists

comp(5983..6483)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_6
unknown

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comp(6494..7321)
DNA (828bp) protein (276aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_7
Tribolium castaneum, Tribolium, Coleoptera, Neoptera, Arthropoda, Metazoa

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comp(7290..7664)
DNA (375bp) protein (125aa)
ik2, ikkb; IKK epsilon; K05410 TANK-binding kinase 1 [EC:2.7.11.10]
IKK epsilon n=1 Tax=Tribolium castaneum RepID=D6WPQ6_TRICA
IKK epsilon {ECO:0000313|EMBL:EFA07517.1}; TaxID=7070 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium.;" source="Tribolium castaneum (Red flour beetle).;"
SCNpilot_expt_500_bf_scaffold_1724_8
unknown

Not on your lists

comp(7776..7937)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_9
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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comp(8118..8621)
DNA (504bp) protein (168aa)
PREDICTED: inhibitor of nuclear factor kappa-B kinase subunit epsilon n=1 Tax=Ochotona princeps RepID=UPI00032ADB7F
IKBKE; inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
Uncharacterized protein {ECO:0000313|EMBL:ESO85217.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
SCNpilot_expt_500_bf_scaffold_1724_10
unknown

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comp(8758..8925)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_11
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

9106..10932
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4AV64_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO98845.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1724_12
unknown

Not on your lists

11017..11457
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_13
unknown

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comp(11412..11591)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_14
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

11665..13497
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4AV64_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO98845.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1724_15
unknown

Not on your lists

13534..13845
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_16
unknown

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13799..14005
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_17
Vitis vinifera, Vitis, Vitales, rosids, Streptophyta, Viridiplantae

Not on your lists

14079..14489
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=F6HAR9_VITVI
uncharacterized LOC100252544
Putative uncharacterized protein {ECO:0000313|EMBL:CAN70959.1}; TaxID=29760 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis.;" source="Vitis vinifera (Grape).;"
SCNpilot_expt_500_bf_scaffold_1724_18
Hymenolepis microstoma, Hymenolepis, Cyclophyllidea, Eucestoda, Platyhelminthes, Metazoa

Not on your lists

14702..14830
DNA (129bp) protein (43aa)
Protein KINase family member (Kin 1) n=1 Tax=Hymenolepis microstoma RepID=U6ID12_HYMMI
Protein KINase family member (Kin 1) {ECO:0000313|EMBL:CDS27500.1}; TaxID=85433 species="Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Hymenolepididae; Hymenolepis.;" source="Hymenolepis microstoma (Rodent tapeworm) (Rodentolepis microstoma).;"
SCNpilot_expt_500_bf_scaffold_1724_19
unknown

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15907..16125
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_20
unknown

Not on your lists

16167..16421
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_21
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(16730..16918)
DNA (189bp) protein (63aa)
Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7SHY7_NEMVE
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EDO36656.1}; Flags: Fragment;; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
SCNpilot_expt_500_bf_scaffold_1724_22
unknown

Not on your lists

comp(17031..17429)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1724_23
unknown

Not on your lists

17738..18310
DNA (573bp) protein (191aa)

This feature has no annotations

Displaying 23 items

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